Gene Dgeo_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1922 
Symbol 
ID4057670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2025354 
End bp2025542 
Gene Length189 bp 
Protein Length62 aa 
Translation table11 
GC content67% 
IMG OID641230953 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_605386 
Protein GI94986022 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.589844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.309934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCC AGCCCTACCC GTACCGTGAG GGCCTCACCC TGCACGACCT GCTGCGCGAG 
CTGAACGTGT CGCCCGAACG GGTGGCCGTC GCGGTGGGCG ACGACTTCTA TCCCGGCGCG
CGCATCCCCG ACCGGCCCCT GGAAGAACAG GATGTCATCG AAATCGTCCG CATCATCGGA
GGAGGTTGA
 
Protein sequence
MNGQPYPYRE GLTLHDLLRE LNVSPERVAV AVGDDFYPGA RIPDRPLEEQ DVIEIVRIIG 
GG