| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1869 |
|---|
| Symbol | |
|---|
| ID | 4058995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1965802 |
|---|
| End bp | 1967019 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641230897 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_605333 |
|---|
| Protein GI | 94985969 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0220689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG GAACGTTTGA GCGGACGAAG CCTCACGTGA ACGTGGGGAC GATCGGACAC
GTGGACCACG GGAAGACCAC GCTGACAGCA GCGATTACCT TCACGGCGGC GGCGATGGAC
CCGACCGTCG AGAAGCTGGC CTACGACCAG ATCGACAAGG CGCCCGAAGA AAAGGCCCGC
GGCATCACCA TCAACACCGC CCACGTCGAG TACAACACCC CCGCGCGGCA CTACAGCCAC
GTCGACTGCC CCGGTCACGC CGACTACGTC AAGAACATGA TCACCGGCGC GGCCCAGATG
GACGGCGCGA TCCTGGTGGT CTCCTCGGCC GACGGCCCCA TGCCCCAGAC CCGCGAGCAC
ATCCTGCTGG CCCGTCAGGT GGGCGTGCCC TACATCGTCG TCTTCATGAA CAAGGTCGAC
ATGGTCGACG ACGAAGAACT GCTGGAACTC GTCGAGATGG AAGTGCGCGA GCTGCTCTCG
AAGTACGAGT TCCCCGGCGA TGATCTGCCG GTGATCAAGG GCAGTGCTCT GCAGGCGCTG
GAAGCGCTGC AGCAAAACCC CAAGACCGCG CGCGGCGAAA ACCCGTGGGT CGACAAGATC
TGGGAACTGC TGGACGCGAT CGACGCCTAC ATCCCCACCC CCGAACGCGC CACCGACAAG
ACCTTCCTGA TGCCGGTGGA AGACGTGTTC ACCATCACGG GTCGCGGCAC CGTGGCCACG
GGCCGCGTGG AACGCGGCGT GTGCAAGGTG GGCGACGAAG TGGAGATCGT GGGGCTGCGC
GACACCAAGA AGACCACCAT CACTGGGGTG GAAATGCACC GCAAGCTGCT GGATCAAGGC
ATGGCCGGGG ACAACGTGGG CGTGCTGCTG CGTGGTGTGG CGCGTGACGA CGTGGAACGC
GGGCAGGTGC TGGCCAAGCC GGGCAGCATC ACACCGCACA CCAAGTTCGA GGCCAGCGTG
TACGTGCTGT CCAAGGATGA AGGGGGCCGT CACTCGGCGT TCTTCGGCGG GTACCGGCCG
CAGTTCTACT TCCGCACGAC GGACGTGACG GGCGTGGTAG AACTGCCCGC GGGCGTGGAA
ATGGTGATGC CCGGGGATAA CGTCAGCTTC ACCGTTGAGC TGATCAAGCC CATCGCCATG
GAAGAAGGCC TGCGCTTCGC CATCCGCGAA GGTGGCCGCA CCGTCGGCGC TGGCGTCGTC
ACCAAGGTCC TGGAGTAA
|
|---|
| Protein sequence | MAKGTFERTK PHVNVGTIGH VDHGKTTLTA AITFTAAAMD PTVEKLAYDQ IDKAPEEKAR
GITINTAHVE YNTPARHYSH VDCPGHADYV KNMITGAAQM DGAILVVSSA DGPMPQTREH
ILLARQVGVP YIVVFMNKVD MVDDEELLEL VEMEVRELLS KYEFPGDDLP VIKGSALQAL
EALQQNPKTA RGENPWVDKI WELLDAIDAY IPTPERATDK TFLMPVEDVF TITGRGTVAT
GRVERGVCKV GDEVEIVGLR DTKKTTITGV EMHRKLLDQG MAGDNVGVLL RGVARDDVER
GQVLAKPGSI TPHTKFEASV YVLSKDEGGR HSAFFGGYRP QFYFRTTDVT GVVELPAGVE
MVMPGDNVSF TVELIKPIAM EEGLRFAIRE GGRTVGAGVV TKVLE
|
|---|
| |