Gene Dgeo_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1127 
Symbol 
ID4058295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1198797 
End bp1200209 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID641230142 
Productaspartate kinase 
Protein accessionYP_604593 
Protein GI94985229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.892413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00887106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTATT CGCTCCTCGT GATGAAGTTC GGCGGCACCA ACATGCAGGA TGCCCAGGCG 
ATCCGCCACA GCGCCTCGCT GGCGGCCCGC AGCATCCGCG AAGGCGTCAA GGTGGTGGTG
GTGGTGTCCG CGATGGCAGG CGTGACCAAT CAGCTGCTGG GGCTGGCCGA CGCGGCGCAG
CGCGGCGATA TCGCAACGGC CAACGATGAG ATTGCGGCGC TGCGCACCCG CCACTTTGCA
GCGGCCCAGG AACTCGGCGC AGCGCCCGAT AGTGAGGTGG TGCGTGAGAT CCGCGAGCTG
CACGAGACGC TGCGCCAGGC CGTGTATGGC GTGTACCTGC TGCGCGAACT CACCCCCCGC
AGCCGCGACC TGATTGTCGC CTTTGGTGAG CGGTTCAGCG CCCCGCTGAT GCGTCTGGCG
CTGGAGGGGC AGGGCCTTTT GGCCCACCAC CTCACCGGCG GGCAGGCGGG CATCACCACG
GACACGCACT TCGGCAACGC GCGTCCCCTG CCGGGTACCT ACGAACGCAT CCGCGACCGA
CTGGGCGGCC TGCTGGCAGC GGGCGTCACA CCAGTCGTGG CGGGCTTCAT GGGCGAGACC
GAGGAGGGGG CCATCACCAC CCTGGGCCGC GGCGGCACCG ACTTTTCTGC CACGATCATC
GGCAAGGCGC TGGACGCCGA CGAGGTGTGG GCCTGGAAGG ACGTGGACGG CGTGATGAGC
GCCGATCCAC GCGTCGTGCC AGACGCCCGC AACATCGAGG TCCTCAGCTA CGGGGAGGTG
ATGGAGCTCG CCTACTTTGG CGCGAAGGTG CTGCATCCCC TCGCGGTGAC GCCCCTCCAG
GAAAGCGGGA TTCCCCTGCG CGTGAAGAGT GCCGCCGATC CCGACTTTCC CGGCACGCTG
GTGCAGGAGG GCGCCCACAA CGAGGCGGGC CATCCGGTCA AGGCGGTGAC CGCCATCCGC
CGCGTGAGCA TCATCAACGT GACCGGCGCT GGGGTGTTGG GCGTGCCGGA GGTGGTGGCC
AGCCTGTTCG AGGCCATCGC CCGCGAGAAC ATCACCCTGC TGATGGTGTC TCAGAGCAGC
TCCATGAGCA ATGTCTCGCT GGCGGTGCAG AGCGCCGACG CCGCGCGGAC CCTCGACGCG
CTGCGCCGCA GGGTGACCGG CGAGCTGAAC ATCGAGGAGC AGCCCGGCGT GGCGGTCCTC
GCGATCGTGG GCGCGGGGAT GCGCGGTCAG AAGGGGGTGG CCGCGCGGCT GTTTGGCGCG
CTCGCCGCTG CCGACGTCAA CATCCTGATG ATCAGCCAGG GGTCCAGCGA GCTGAACATC
AGTGTGGCCC TCGAGGACGC CCAGGTTGAG CGGGCCACCC GCGCCGTTCA CGCGGCCTTT
GGGCTGGGGC AGACGGCAGC GGCGGCGGAC TGA
 
Protein sequence
MAYSLLVMKF GGTNMQDAQA IRHSASLAAR SIREGVKVVV VVSAMAGVTN QLLGLADAAQ 
RGDIATANDE IAALRTRHFA AAQELGAAPD SEVVREIREL HETLRQAVYG VYLLRELTPR
SRDLIVAFGE RFSAPLMRLA LEGQGLLAHH LTGGQAGITT DTHFGNARPL PGTYERIRDR
LGGLLAAGVT PVVAGFMGET EEGAITTLGR GGTDFSATII GKALDADEVW AWKDVDGVMS
ADPRVVPDAR NIEVLSYGEV MELAYFGAKV LHPLAVTPLQ ESGIPLRVKS AADPDFPGTL
VQEGAHNEAG HPVKAVTAIR RVSIINVTGA GVLGVPEVVA SLFEAIAREN ITLLMVSQSS
SMSNVSLAVQ SADAARTLDA LRRRVTGELN IEEQPGVAVL AIVGAGMRGQ KGVAARLFGA
LAAADVNILM ISQGSSELNI SVALEDAQVE RATRAVHAAF GLGQTAAAAD