Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1058 |
Symbol | secA |
ID | 4057843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 1125658 |
End bp | 1128267 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641230075 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_604526 |
Protein GI | 94985162 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.981267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGTG TCCTCAACAA AGTGTTTGAT ACCAACCAGC GCGACGTGCA GCGCATCGTG AAAACGGTGG TGCAGCCGGT CAATGCGCTG GAAGAAGAAA CGATGAAAAT CGAAAATCTT GCCGAGGCGT TTATGCGGCT GCGCCAGCGG GTGCAGGAGG GCGGTGAGTC GCTGGATGAC GTGCTCGTGC CTGCTTTTGC CCTGATCCGG GAAGCGGGCC GCCGCGCGAT TGGCAAGCGG CACTACGACG TGCAGCTCAT CGGCGGGACG GCCCTGCACC AAGGCCGCAT CGCGGAGATG CGCACCGGTG AGGGCAAGAC CTTGGTTGCC ACGCTGGCGC TTGCGCTCAA CGCCTTGGAG GGCAAGGGTG CCCACCTCGT CACCGTCAAC GATTACCTCG CCCGCGTCGG CGCCGAGGAA ATGGGCCTGC TGTACCGCAC GCTGGGCCTC TCGGTCGGCC TGATCACCCG CGACATGCAG CCGCACCAGC GCCAGGCCGC CTATGCCTGC GACATCACCT ACGTCACCAA CTCGGAGTTG GGCTTTGACT ATCTGCGCGA CAATATGGCC CAGAGCCGCG AGCAGCTGGT GCTGCGCGCA GATAATCCCC TGCACTACGC CATCGTCGAC GAGGTGGACT CCATCCTGAT CGATGAGGCC CGCACGCCGC TGATTATCTC GGGCGCGGCC GAAAAGGCGA CCGACCTCTA TTACGTGTAC GCCAAGCTGG TCAAGCGGCT TCAGCGCGGT GAACCCGCCG AACCCGGCAA GCGAACCGAG CCGACCGGCG ACTACACCAT CGACGAGAAG GGCAAGCAGG TGCACCTGAC CGAGCAGGGC ATCGCCAAGA TTGAGCGTCT GCTCTCGCTG GGTGACCTCT ACAGCCCGGA AAACATGGAC AAAGCGCACA TGATCACCCA GGCGATTCGT GCGCGCGAGC TGTACCACCG CGAGAAGGAC TACATCGTGA ACGCGGAGGG CGAGGTCGTC ATCATCGATG AGTTTACCGG TCGCAGCATG CCAGGGCGCC GCTACGGAGA AGGTCTACAC CAAGCTATCG AAGCCAAGGA AGGCGTCAAG ATCGAAAACG AGAACCAGAC GCTCGCCACG ATCACCTACC AGAACTTCTT CCGCCTGTAC GACAAGTTCG CCGGGATGAC CGGCACCGCC AAGACCGAGG AAAAGGAGTT CCTCGACATC TACGGCTCCG ACGTGCTGGT GATTCCCACC AACAAGCCGG TGATTCGTCA GGACGCTGAC GACTTGGTGT ACCGCACCCG CATGGGCAAG TACCAGGCTG TCGTCGAGGA AGTCAAGCAG ATGCACGCAA CCGGGCGGCC GATCCTGATC GGCACCGCGA GCATCGACAC CTCCGAGCAG CTCAGCGCCC TGCTGAAGCA GGCTGGGATT CGCCACTCGG TTCTCAATGC CAAGTACGAG GCGCAGGAGG CGAGCATCAT TGCGCAGGCG GGCCGCTCGG GCACCGTGAC AATCGCCACC AACATGGCTG GGCGCGGAAC CGATATCATG TTGGGTGGCA ACGCGGAATT CATCCTGGGT GAGGCCATCG AGCAGAATTT CGGCATCAGC CGCTTCACGC CCGAGGCGGA GGCATTTATC AAGGCGATCG GCCGCGAGGA TCCCGAAGCG GTAACCCTGG GCCTGCGGAT TCCCGGCATG ACCGAACAGT TCATTCGGCA GGCGCAGCAG CTCCAAAAGG ACATCATTGC TGACCGTGAG CGCGTGCGAG AACTCGGCGG CCTGCATATC ATTGGCACCG AGCGCCACGA GTCGCGCCGC ATCGACAACC AATTGCGCGG GCGTGCGGGT CGTCAGGGTG ACCCGGGGTC CAGTCGCTTT TACGTGTCCT TTGAGGACGA CCTGATGCGC CTCTTTGCGA GTGACCGCGT GGTGGCCATG ATGGACCGCC TGGGGATGGA TGACACCCAA CCCATCGAGG CCAAGATGGT GACTGGAGCG ATCGAGCGCG CACAGGCCCG CGTGGAGGAT CGCAACTTCG GGATCCGCAA GCAGCTGCTG GAGTTCGACA ACGTGATGAG CAAGCAGCGC GACATCATCT ACGCCCAGCG CCGCGAGGTG CTGCTTGGCA CCGACGAGGA TGTGGAAGAA TCGACCGAGG GCATGATTGC GGACTTCACC GAGATGCAGC TCGCCTTCTA CGCGCCCATC GACCAGCCCG CCGAAAGTTG GGACCTGGAG ACACTGCGGA CCAACATGCT TGAGGCGGTA CCTCAGCTCG AGCACTACGA CTTCGAGGCG CTGCGTCATA TGGCCCCAGA AGCTGCCCAC GCGCACCTGC TCGAAGCGGT GGCCGACGCC TTTGACGCCC GCAAGGCCGA GCTTGGCCCG ACCATGCTCA ATAGCCTCGC GCGCTATGTC CTGCTGCAGG TCGTCGACCA GCACTGGAAA GAACACCTGC ACGGGATGGA CGTGCTGAGG CAGGGCATCG GCCTGCGCGG CTACGGCCAG CGCGACCCCT TCACCGAGTA CAAGTTCGAG GCGACGAACA TGTTCAACGA CATGATTGAC AATCTCAAGG CGGACGTGAC CAAATTCATC TTCCGCATGC AGTTCGGTCA GGCGAGCTGA
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Protein sequence | MFRVLNKVFD TNQRDVQRIV KTVVQPVNAL EEETMKIENL AEAFMRLRQR VQEGGESLDD VLVPAFALIR EAGRRAIGKR HYDVQLIGGT ALHQGRIAEM RTGEGKTLVA TLALALNALE GKGAHLVTVN DYLARVGAEE MGLLYRTLGL SVGLITRDMQ PHQRQAAYAC DITYVTNSEL GFDYLRDNMA QSREQLVLRA DNPLHYAIVD EVDSILIDEA RTPLIISGAA EKATDLYYVY AKLVKRLQRG EPAEPGKRTE PTGDYTIDEK GKQVHLTEQG IAKIERLLSL GDLYSPENMD KAHMITQAIR ARELYHREKD YIVNAEGEVV IIDEFTGRSM PGRRYGEGLH QAIEAKEGVK IENENQTLAT ITYQNFFRLY DKFAGMTGTA KTEEKEFLDI YGSDVLVIPT NKPVIRQDAD DLVYRTRMGK YQAVVEEVKQ MHATGRPILI GTASIDTSEQ LSALLKQAGI RHSVLNAKYE AQEASIIAQA GRSGTVTIAT NMAGRGTDIM LGGNAEFILG EAIEQNFGIS RFTPEAEAFI KAIGREDPEA VTLGLRIPGM TEQFIRQAQQ LQKDIIADRE RVRELGGLHI IGTERHESRR IDNQLRGRAG RQGDPGSSRF YVSFEDDLMR LFASDRVVAM MDRLGMDDTQ PIEAKMVTGA IERAQARVED RNFGIRKQLL EFDNVMSKQR DIIYAQRREV LLGTDEDVEE STEGMIADFT EMQLAFYAPI DQPAESWDLE TLRTNMLEAV PQLEHYDFEA LRHMAPEAAH AHLLEAVADA FDARKAELGP TMLNSLARYV LLQVVDQHWK EHLHGMDVLR QGIGLRGYGQ RDPFTEYKFE ATNMFNDMID NLKADVTKFI FRMQFGQAS
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