| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0928 |
|---|
| Symbol | |
|---|
| ID | 4059211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 992283 |
|---|
| End bp | 993635 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641229948 |
|---|
| Product | transposase, IS605 OrfB |
|---|
| Protein accession | YP_604399 |
|---|
| Protein GI | 94985035 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.621318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.596351 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATTA CGCTCACCGC CAAACTGAAG TTGCGGCATA CTCCAGAGCA GAAGAAAGCT
CTGGACGCCG TAACTTTGGC GTACCGTGAC GCGCTGAACT TCACCTCCCA GAAGGCGTTT
GAAATGGGTA AAACCAGCAA CGCCGCCAAG ATCCAGAGAG AGGTGTACGC AACTCTGCGG
GAAAGGTTCG GGCTGGGCGC TCAAATGGCC TGCTCCGTGC CGCGTTACGT TGGAGCCGTC
TACAAAACTC TCTGGGCGAA GGCCAAACAG AGTAAGGCAG CGCGTGAGGT CAACCCCAAA
GCCAAGCGGT ATAAGGGACT GGACAACGCG CCCAAGTTCG TTTCTCGCAC CCTGAGCTAT
CAGTACCAGC GCGATTACTC GTTCAAGAAA GGCCAGCAGG TGAGTATTTC CACCCTGAAT
GGCCGTGTGG TGTTGCCCTA TGAAGGCTAC GCCAAACACC TTGAATACAT CGCGCAGGGG
GCTGAAATTG GGGCAGGCAA ACTCTGGTAC AGCAAAGCCA AAAAGCAGTA TTTCCTTTTG
GTTCCGCTGA CCTTTGAATT GCCCGACCCC GACCCCATGA CCCATAAACA GGTGGTGGGG
GTGGATGTGG GAATGCGCTA CTTTGCCACT GCATCGAACA CCTCTGGGAA AGCTCTTTTC
AAGTCGGGTA AGGCCACGCT GCGTAAAGCA GAGCGGTTCC AAAAGGCCCG CAAATCGCTT
CAGCAAAAAG GCACTCGTTC CGCCGTGCGC CGTTTGGTGC AACTATCGGG CCGAGAAAGA
CGGTTTATTG CTGAGACCAA CCACGCCATC GCCGCTGAAA TCCTTTCCCG CTTCCCAAAT
GCTTTTATCG GCGTCGAGGA GCTGACCGGA GTCCGTGACC GCACCGAACG GCGCAGCCGG
AAGAACAGTT CCGAGAAAAC CCGGAAGGCA AACCGTAGAC GTGCAAGGTG GAGTTACGCC
GAGTTGCTGA GCTTCCTGGC GTACAAAGCA CCGTTGCACG GTTCTATGGT GGTTAAAGTT
GACGCCCATT ACACCAGCCA AACCTGCCCC AGGTGTGGAC ACTGCTCAAG AGAGAACAGG
CCGCACAAGG GGCTGATGTT TATCTGTGAA AGCTGTGGGT ATCAGTTGCA CGCTGACCTT
GTAGGGGCAA GGAACATAGG ACTCAGGGCA TTGCTTGTCC GGCAAGACTG GGCAAGCACG
GGGTGTTTGT CATGCACCCC TGGTCGCCCT CAAAGCGCAG ACCCGCAAGC TGGGTCTGCT
GGGCGAGATG TGTCGGACGC TGAAGCCAAA GCTGAGCGCC TGAAAAGGTA CTCAGAATTG
CGGTGGAGTC CAGACGCAAG CCCCCGCCTT TAG
|
|---|
| Protein sequence | MKITLTAKLK LRHTPEQKKA LDAVTLAYRD ALNFTSQKAF EMGKTSNAAK IQREVYATLR
ERFGLGAQMA CSVPRYVGAV YKTLWAKAKQ SKAAREVNPK AKRYKGLDNA PKFVSRTLSY
QYQRDYSFKK GQQVSISTLN GRVVLPYEGY AKHLEYIAQG AEIGAGKLWY SKAKKQYFLL
VPLTFELPDP DPMTHKQVVG VDVGMRYFAT ASNTSGKALF KSGKATLRKA ERFQKARKSL
QQKGTRSAVR RLVQLSGRER RFIAETNHAI AAEILSRFPN AFIGVEELTG VRDRTERRSR
KNSSEKTRKA NRRRARWSYA ELLSFLAYKA PLHGSMVVKV DAHYTSQTCP RCGHCSRENR
PHKGLMFICE SCGYQLHADL VGARNIGLRA LLVRQDWAST GCLSCTPGRP QSADPQAGSA
GRDVSDAEAK AERLKRYSEL RWSPDASPRL
|
|---|
| |