| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0792 |
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| Symbol | mnmA |
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| ID | 4058086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 848745 |
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| End bp | 849890 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641229812 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_604263 |
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| Protein GI | 94984899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.548786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.639266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC AGGACAAGGC AAGTCAGCGG GTTCTGTGTG CGATGTCGGG CGGGGTGGAT
TCCAGCGTCA CGGCAGCGCT GCTGAAAGAC GCGGGGTATC AGGTGATCGG CGCCATGATG
CGCTTTTGGC CCGATGACAA GCGCGTGGAT ACTTTCGACA CCTGCTGCTC GCCGGATGCC
GCCTACGAGG CCCGCCGGGT GGCCGAACAG GTGGGCGTGC CGTTCTATCT GCTCGACTAC
CGCGAACAGT TTCAGCACCA CATCGTCGGT CCCTTCCTCA GCGAGTACGC GCAGGGCCGC
ACGCCCAACC CTTGCGTGAA CTGCAACACG AAGGTGAAGT TCGATGAGCT GGTGAAAAAG
GCGAAGATGC TGGGCTGCCG TTACGTGGCG ACCGGTCACT ATGTGAAGCG AGTGGAGCGC
GAGGACGGCA GCGTCGAGTT CCACCGAGGT GACGATCCCC GCAAGGACCA AACCTATTTC
CTGTGGGGCA CCCCGCGGGA GGCGCTGCCC TTCATCCTCT TCCCGGTGGG CGAGCTGGAA
AAGCCCCGGG TGCGCGAGAT CGCCGCCGAG AAGGGCCTGC TGACCGCCCG CAAGCCCGAG
AGCCAGAACA TCTGCTTTGT GCCTGGCAAG GTGCAGGACT TCGTGGCCGA ACACCTCCCG
CAGCGTCAGG GCTTGATCCG CGAGATCCGG ACCGGGGAAG TGGTGGGCGA ACACCTGGGC
ACCCAGTTCT ACACCCTGGG CCAGAAGAAA GGCCTGGGCC TGTACCAGAC CCACCGTGTC
CGCCACGTCG TCCACCTCGA CCCCGAGACG AATACCGTGT GGGTGGGCGA CTACGAGGAC
TGCCTGTGGA CCGGGTTGAA GGCGGAGGGC GCCAATTACC TCCTCGACCT GGCCGAGTTG
CCACGGGAGG TGGAGGTTCA GGTGCGCTAC CGCACGAAGC CGGTGCGGGC CACGGTCCTG
CACGCCGACG AACACGGCTT CGAGTTGCAG TTCGAGGAAC CCCAGTTCGC GGTCGCGCCG
GGGCAGAGCG CGGTGCTGTA TGCGGGAACG CGGCTGCTGG GGGGCGGGCT GATCGCGGAC
CACGCGCGGA ACTTGCCGGT GGTGCCCGCC GACCAGGCCG CGCAGCCCGT TCCTGTTTCA
GGTTAG
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| Protein sequence | MSGQDKASQR VLCAMSGGVD SSVTAALLKD AGYQVIGAMM RFWPDDKRVD TFDTCCSPDA
AYEARRVAEQ VGVPFYLLDY REQFQHHIVG PFLSEYAQGR TPNPCVNCNT KVKFDELVKK
AKMLGCRYVA TGHYVKRVER EDGSVEFHRG DDPRKDQTYF LWGTPREALP FILFPVGELE
KPRVREIAAE KGLLTARKPE SQNICFVPGK VQDFVAEHLP QRQGLIREIR TGEVVGEHLG
TQFYTLGQKK GLGLYQTHRV RHVVHLDPET NTVWVGDYED CLWTGLKAEG ANYLLDLAEL
PREVEVQVRY RTKPVRATVL HADEHGFELQ FEEPQFAVAP GQSAVLYAGT RLLGGGLIAD
HARNLPVVPA DQAAQPVPVS G
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