| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0617 |
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| Symbol | |
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| ID | 4058067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 658120 |
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| End bp | 660468 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641229632 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_604088 |
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| Protein GI | 94984724 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000684993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.851238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAATC AGCCATACCG CATTCAACGG GCCGCCGTGA TCGGCGCGGG CGTGATGGGC
GCCGCGATTG CCGCCCAGCT TGCCAATGCG GGCATTCCCG TCCTGCTCCT CGACATCGTG
CTGCCGGATC AGCCTGACCG CAACTTCCTC GCCAAGCAGG GGGTCCAGCG AGCGCTTAAG
GCCCGGCCCG CCGCCTTTAT GGACCCGGAC CGCGCGTCGC TCATCACGCC CGGCAACCTC
GAAGACGACC TGAAGAAACT GAAGGACGTC GACTGGATTC TCGAGGCCAT CATCGAGAAG
CTGGACGCCA AGCGTGACCT GTGGGCCAAG GTGGAAGGGG TCGCCAAGAA GACGGCGATC
ATCAGCTCCA ACTCCAGCGG CATCCCGATG CACCTTCAGA TCGAGGGCCG CTCGGAAGAC
TTCCAGCGCC GTTTCGTGGG TGCGCACTTC TTTAACCCGC CGCGTTACCT GCACCTCCTC
GAAGTCATCC CCACGCCCAA GACCGATCCT GAGGTCTTGA AGGCATTCGT CGAATTCGGT
GAACACGTGC TGGGCAAGGG CATCGTGATT GCCAACGACG TACCGGGCTT CGTCGCCAAC
CGCATCGGCG TGTACGGCAT TGTCCGCGCG ATGCGGCATA TGGAACGCAC AGGCCTCACC
CCCGACGAGG TGGACCAGCT CACCGGTCCC GTTCTGGGCC GCGCCAAGAG TGCGACTTTC
CGCACCGCCG ACCTCTCGGG CCTCGACATC ATTTACCACG TCGCCAACGA CCTGAATAAG
GCCACGCCGG AGGACGAGGA TTTCAGCCTC ACCGAGACCT TTAGGAGGCT TGTCGAGGAG
AAGAAGTTCC TCGGTGACAA GACCGGCAGC GGCTTCTACA AGAAGACCAA GGATGAGAAG
GGCAAGACCA AGATTCTGTC CCTCAACCTT GGCACGCTGG AATACGAGGA CCGCGGCAAG
GTGAAGGTGC CCCTTGTCGA GAGCGTCAAG AACCAGCCTC TCGCCCAGCG CGTGAAGGCT
CTTTATACCG CCGAAGGCAA GGAGGGCGAT TTTCTGCGCG GCGTGATGAA TGATGGCTTC
TGGTATGCCG CCAAGATGGC TGGGGTTGTC TCAAACCGCC TGCAGGACAT TGACAACGCC
CTGAAGTGGG GCTTTGGCTG GGAGGAAGGC CCCTTCGAGA CGATGGACAC CCTGGGTGTG
CAGAACGTGA TTGCCAACCT GGAAGGTGAA GGCCGCCCCC TCCCTCCCCT GCTCCAGAAG
ATGAAGGAGA CGGGCCACGA GCGGTTTTAT CAGGACGGCG AAGTCGTGAC GCCCTCGGGC
GAGCTGACGA AGTACGAAGC GCCCTACTTC ATCCTCAAAG ACCTCAAGAA GGACGCCACG
AAGGTCATCA AGAAGCGTCC CGGCGCGAGC ATCGTGGACC TGGGGGACGG CGTGCTGCTC
GTCGAGTGGC ATGCGAAGAT GAACGCCCTC GGCGAGGACC AGCTCCGCGC CGTCCAAGAC
GCGCACAAGC TCGTTCAGGA GATGGGCTAC GCGGGGCTGG TGCTGGGCAA CCAGGGCGAG
AACTTCAGCG CCGGAGCCAA CCTGCCGCTG ATCCTCTCGC AGGCGCAGGA CGAGGAATGG
GACGAGCTGG ACAGCGCCAT CCGGCAGTTC CAGCAGATGA CCACCTCGAT GCGCTTCAGC
CCGCATCCGA CGGTCGCAGC GCCCTTCAAC CTGGCGCTGG GTGGCGGCTG TGAGTTTTCC
ATCCACGCCG ATCACATCGT CGCCAGCGCG GAGCTGTATA TGGGTTTGGT GGAAGTCGGC
GTGGGCCTGA TCCCCGCCGG TGGCGGCACC AAGGAAATGC TGCTGCGCTT CACCGATCAG
ATTCAGCCCG GCCAGCCCCT TCTGCCCGCC GTGCAGCGCG CTTTTGAGCT GATCGGCACC
GCCAAGGTGT CCAGCAGCGC CCTCGAGGCC CGCAAGCTCG GCTTCCTGCA CGACCACGAC
ACCATCGTGA TGAACAAAAA CCACATCATT GAGGAGGCCA AGCGGATGGT GCTGGCCCTC
GCGCCGGGGT ATCTCCAGCC CACCCCCCGC CAGGACATTC CCGTGATGGG GGACGCGGCG
ATTGCTGCCG TCAAGATGGC GCTGTACGGG ATGCGCGAGG GTGGCTACGT CAGCGAGTAC
GACACGGTGG TGGCCACTGA ACTCGCCCGC GTCCTCTCCG GCGGCACCGG CAACAACCGA
AACGCGAAGG TCAGCGAGGA GCATCTCCTC GATCTAGAGC GCGAGGCCTT CTTGACCTTG
CTGGGCAAGA AGGGCACCCA GGACCGCATC GCGCATATGC TCAAGACCGG CAAGCCCTTG
CGGAACTGA
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| Protein sequence | MQNQPYRIQR AAVIGAGVMG AAIAAQLANA GIPVLLLDIV LPDQPDRNFL AKQGVQRALK
ARPAAFMDPD RASLITPGNL EDDLKKLKDV DWILEAIIEK LDAKRDLWAK VEGVAKKTAI
ISSNSSGIPM HLQIEGRSED FQRRFVGAHF FNPPRYLHLL EVIPTPKTDP EVLKAFVEFG
EHVLGKGIVI ANDVPGFVAN RIGVYGIVRA MRHMERTGLT PDEVDQLTGP VLGRAKSATF
RTADLSGLDI IYHVANDLNK ATPEDEDFSL TETFRRLVEE KKFLGDKTGS GFYKKTKDEK
GKTKILSLNL GTLEYEDRGK VKVPLVESVK NQPLAQRVKA LYTAEGKEGD FLRGVMNDGF
WYAAKMAGVV SNRLQDIDNA LKWGFGWEEG PFETMDTLGV QNVIANLEGE GRPLPPLLQK
MKETGHERFY QDGEVVTPSG ELTKYEAPYF ILKDLKKDAT KVIKKRPGAS IVDLGDGVLL
VEWHAKMNAL GEDQLRAVQD AHKLVQEMGY AGLVLGNQGE NFSAGANLPL ILSQAQDEEW
DELDSAIRQF QQMTTSMRFS PHPTVAAPFN LALGGGCEFS IHADHIVASA ELYMGLVEVG
VGLIPAGGGT KEMLLRFTDQ IQPGQPLLPA VQRAFELIGT AKVSSSALEA RKLGFLHDHD
TIVMNKNHII EEAKRMVLAL APGYLQPTPR QDIPVMGDAA IAAVKMALYG MREGGYVSEY
DTVVATELAR VLSGGTGNNR NAKVSEEHLL DLEREAFLTL LGKKGTQDRI AHMLKTGKPL
RN
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