Gene Dgeo_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0235 
Symbol 
ID4059143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp220267 
End bp220902 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID641229235 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_603707 
Protein GI94984343 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTCCCA AGCCGGTACC GGAGCCTCTG CTCCTTTCCA GCCTGGCACA GTACGCCTAC 
TGCCCGCGCC GCTGCGCCCT CGTCCATGTT GAGCAGGAGT GGGCCGATAA CATCTGGACC
GTACGGGGCG AACAACTGCA CGAGCGGGCA CACGGCGGGG GGGAAGAGGC GCGCGGGGAG
GTGCGTATTC TGCGCGCCCT GCCACTCTTC TCCCACCAAC ACGGCCTTGC AGGCACCGCA
GATGTGGTGG AGTTGCGGCC CGTGCCCTAT CCGGTGGAGT ACAAATCCAG CCGTTACCCC
AAGACCCACC GGCTGGGGCA TCTGGTCGAG GAAGTGCAGC TCTGCGCCCA GGCTCTGTGT
CTGGAGGAGA TGTTCGGGCA ACCCGTGCCG CAGGGCGCCC TCTACCACAT CGCCAGTCGC
AAACGGCGCG AGGTGACCTT TACGCCAGAA CTGCGCCGCG CCGTGCTGGA AGCCGCAGGC
GGCGTGCGTG AGCTGCTGCG CTGCGGCACT CTCCCCCCGC CCGCCGCCGA CGACCGTTGC
CACTGGTGCA GTCTCCAGGA GGCGTGCGAA CCCTTCACGC CCCGCGACTT TCCACACGGC
TATGATCCCT TCAGTACCTC TCTCGAGGAC ATGTGA
 
Protein sequence
MFPKPVPEPL LLSSLAQYAY CPRRCALVHV EQEWADNIWT VRGEQLHERA HGGGEEARGE 
VRILRALPLF SHQHGLAGTA DVVELRPVPY PVEYKSSRYP KTHRLGHLVE EVQLCAQALC
LEEMFGQPVP QGALYHIASR KRREVTFTPE LRRAVLEAAG GVRELLRCGT LPPPAADDRC
HWCSLQEACE PFTPRDFPHG YDPFSTSLED M