Gene Dgeo_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0193 
Symbol 
ID4058439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp180096 
End bp181013 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID641229193 
Productalpha/beta hydrolase fold 
Protein accessionYP_603665 
Protein GI94984301 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.306421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CCGACGAGTC CAACTTCGAG CGCCTGAACG GCGCGGACCT GTACTTCGAG 
GTGACCGGCC CGCAGGACAC TCCGGGGGCC GAGCCGCCCA TTGTGTTTCT ACACGGTGGC
CCCGGCTACA ACAGCTACTC GTTCCGCGAA CTGTTTGGAG ACCGCCTGCA GGGCCGCCGG
GTGGTGTACC TCGACCAGCG CGGTTCGGGA CGCAGCGGTC CCCTACAGGA CACCGAACAG
GGGGGTGAGA CGTTGGACCT CGATACGCTG GTCGCTGACG TGGAGGCGCT GCGCGAGCAC
CTGGGCGCCG AACAGATCGT GCCGCTGGGT CACGGTTTCG GGGCGCTCGT GGCCCTGGAG
TATGCCCGGC GGCACCCCAC GCGCACGGCG CGCGTGATTG TCGTCAACCC CTGGGTACAT
TTCCCCGAAC TCGCCCTGAC GCTGCTGCGC GAGGCCGCAG CCCTACGCGG GGTGCCGCTC
GATGACCCCG CCCAGGCTGT GCGCGCCCGC ACGCCGGAAG GCCAGTATCC CGCAGTGGGC
GAGGCACGGG TAGAGGCGGC CTTTGCCCTG CTCAACGCCC GCGACCTGCT CAACACGCTG
CAATTTCGTG ACAACGCCAG CCGCATGCGC CTGGAATTTA TTGATGCAGA AGGACAGCTC
AGCGGCGGCG GCGAGGTGCA GGAGGCGCTG GTCAATCAGG GCCTCTGGGA ATTCGAGTAT
CCGCCCTTTT TGCAGGAGCT GCGCCGCCCC CTCTTTGTGA TTGCCGGCGT CCACGACCGC
ACCAGTTACC CCGAACAGGT CGAGTGGTTG GTTGATCTCG GCGGCGCGGA CGTGACGGTG
CTCGACGCGG GCCACTACCC CTGGCTCGAC GATGAGGACG CCTTTGCGGA GGCGCTGGAG
GAGGCCTTGA CGCGTTAG
 
Protein sequence
MSTPDESNFE RLNGADLYFE VTGPQDTPGA EPPIVFLHGG PGYNSYSFRE LFGDRLQGRR 
VVYLDQRGSG RSGPLQDTEQ GGETLDLDTL VADVEALREH LGAEQIVPLG HGFGALVALE
YARRHPTRTA RVIVVNPWVH FPELALTLLR EAAALRGVPL DDPAQAVRAR TPEGQYPAVG
EARVEAAFAL LNARDLLNTL QFRDNASRMR LEFIDAEGQL SGGGEVQEAL VNQGLWEFEY
PPFLQELRRP LFVIAGVHDR TSYPEQVEWL VDLGGADVTV LDAGHYPWLD DEDAFAEALE
EALTR