Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0136 |
Symbol | |
ID | 4057336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 124577 |
End bp | 125290 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641229133 |
Product | metal-dependent hydrolase |
Protein accession | YP_603608 |
Protein GI | 94984244 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.609022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTTCCA GCAGCGTGGC TACACTAGGA GCCATGCAGA TTCGTTTTCT GGGCCAGAGC GCCTTCCTGC TGACAAGCGG TGTCCATCAG CTGCTGATTG ACCCCTTTAT CGCGGGAAAT CCCAAGTCAC CCGTCACCCT CGAGGAGGCG CTGGGCTGGA AGGTGGATGC GGTGCTGATC AGCCACGCGC ACGGTGACCA CTGGGGCAAC GCACTGGACT TTGGCCGGGC AGGGGTACCC GTCATCGGCA CCGCTGAGAT CGGCGGGTAC GCGCAGAAAA ACGGCGCACA GAACGCAATT GGCATGAACA TCGGCGGCAC CTACCGTGCT CCCTGGGGGA GCGTCACCCT CACCCCGGCT TGGCACTCCT CCTCCTTTCC CGACGGTACC TACGGTGGAA TGCCGACCGG CCTGATCATC GAGATGGACG GGGTTCGGGT GTACCACGCG GGCGACACCA ACCTGTTCAG CGACATGCGC CTGATTGGGG ACCGCGGGCT GGACGTGGCT CTGCTGCCGA TCGGGGATCA CTACACCATG GGGCCGGAGG AGGCGGCCCG CACCCTGGAG CTGCTGCGCC CACGTGTCGC CATTCCCATG CACTACGGCA CCTTTCCGGT CCTGACCGGT GACCCGCAGG TCTTTGCGCG GGAAGGCCGG GCGCGCGGCG TGGACGTGCG CGTGCTGGCG CCAGGAGAGA CGGCGGAGGT GTGA
|
Protein sequence | MSSSSVATLG AMQIRFLGQS AFLLTSGVHQ LLIDPFIAGN PKSPVTLEEA LGWKVDAVLI SHAHGDHWGN ALDFGRAGVP VIGTAEIGGY AQKNGAQNAI GMNIGGTYRA PWGSVTLTPA WHSSSFPDGT YGGMPTGLII EMDGVRVYHA GDTNLFSDMR LIGDRGLDVA LLPIGDHYTM GPEEAARTLE LLRPRVAIPM HYGTFPVLTG DPQVFAREGR ARGVDVRVLA PGETAEV
|
| |