Gene Dgeo_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0088 
Symbol 
ID4058685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp82042 
End bp83121 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID641229085 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_603560 
Protein GI94984196 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT TCCCGCGGCT TTTCCTGGGA CACCTGCTGG TCATTCTGAT CGCGCTGGGT 
GCGCTGTTTC TGGGGGTAGA ACTCAGCGCG CCCAGCTTCT ACCAGCATCA CGTGGCGCAG
ATGGTGGCCC TGCTTGGCCC CGAGGGCCGC ACCCTGCGCC CGGACCTGGA AAGCGGTTTG
CGCCGGACCC TGCATAGTGC CCTGCTGGCT GCCCTGCCTT TTGCAGTGGC TGTTGCCGCC
CTCACGGCCT CCCTGACCTC TCGGCGCATC GTGCGGTCAG TGCGGCTCCT CTCGGACGGC
AGCCGGGCAC TCGCGGCGGG ACAGTACCGC CGCCGGCTGC CTGAAACTGG GCAGGACGAA
CTCGCCGCGC TCGCGCACAA CTTGAACGTG ATGGCCGCTT CACTGGAGCG GGTGGAACAG
GACCGGGTGG CCCTGATCGG GAATGTCGGG CATGAGCTGC GGACCCCACT CGCCGCGCTG
CGCGGGTACC TGGAGGCGCT GACCGATGGT GTGATGGTGC CGAGCCAGGC GGCGCCCGCT
TTGCGGCGTG AGGTACGCGC CATAGAGCGC CTCGCCAGCG ACCTGAGCCT GGTATCCCGG
ATCGAGGCGG GGCAGGTGGA GCTCTCCCCG ACGATCTTCA GTGCGCGGAG TCTCCTCACC
GCGACTCTAG AGCGCTTTGG CGACGCCTAT GCTGCGCGCG GGGTTGCGCT GCTGGCCCAG
AATCCACCGG ATGATCTCCG GGTGCGAGCG GACTTTGAGC GGGCCGCGCA GGTGCTGTCC
AACCTGCTGT CCAACGCCCT GCGCCACACA CCGCCGGGGG GCCGGGTCAC ACTGACCGTG
CAGGCGGCGG GAGAGCAGGC CACGTTCAGC GTCGCGGACA CCGGGAGCGG CATTCCCACT
GAACACCTGG AACGAATTTT CGAGCGCTTC TACCGGGTGG ACCCCGCCCG GACACGGGGT
GAGGGGAGTG GCGTCGGTCT CACGATCGCC CGCAGTCTGG TGGAGCAGAT GGGTGGCCGA
ATCGGCGTCA CTTCCGGCAA GGGCGGCAGC ACGTTCACGT TTACTCTGCC TCTGGCTTGA
 
Protein sequence
MKLFPRLFLG HLLVILIALG ALFLGVELSA PSFYQHHVAQ MVALLGPEGR TLRPDLESGL 
RRTLHSALLA ALPFAVAVAA LTASLTSRRI VRSVRLLSDG SRALAAGQYR RRLPETGQDE
LAALAHNLNV MAASLERVEQ DRVALIGNVG HELRTPLAAL RGYLEALTDG VMVPSQAAPA
LRREVRAIER LASDLSLVSR IEAGQVELSP TIFSARSLLT ATLERFGDAY AARGVALLAQ
NPPDDLRVRA DFERAAQVLS NLLSNALRHT PPGGRVTLTV QAAGEQATFS VADTGSGIPT
EHLERIFERF YRVDPARTRG EGSGVGLTIA RSLVEQMGGR IGVTSGKGGS TFTFTLPLA