| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0009 |
|---|
| Symbol | |
|---|
| ID | 4058724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 8833 |
|---|
| End bp | 9510 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641229006 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_603482 |
|---|
| Protein GI | 94984118 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2384] Predicted SAM-dependent methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.400013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAC CAAGCCTTGA TGCTCGCTTG GAAGCGGTCC TGGCCCTGAT CTGCGCCGAA
GTTCACGCGG ATATCGGCTC GGATCACGCG AAGTTGCCCA TCCGACTGGT GCGGGAAGGC
CGGGTCGCGC GCGGCGTGGT CGTCGAACTG AACCCCGGCC CACTCGCCCT TGCTCGCCGG
AACGTGGCTC GCGCCGGGTT GACCCATCGC CTGGAGGTGC GGGCTGGGGA CGGCTTCGCG
CCCCTCGTGC CCGGTGAGGT GGACAGTGCG AGTCTCACCG GGATGGGGGC AGGCACTGTG
GCGGGGATTC TGCGCCGAGC CGGGGACCGG TTGCCTCCCA CCCTGATCGT GCAGCCCAAT
GATTCGCCGC GGCCCTTGCG GATCTGGGCC CATGAGGATG GTTACCACCT GACGGCCGAG
CGCCTGATTC CCGGCCACTG GATCTATCCG GTGCTGCAGC TAGAGCGCCG TGGAGGCCCC
GACCCGGCTT ACCTGGGTCT GCCCCTGAAC GCCGCCCTGC GTTACGGCCC GCACCTGCTG
CAAGCAGGAT CCGCACTGCT GCGTGCGCAG GTCCAGGCCG ATCTCACCCG CCTGACACCG
CTGGCCAGGC CGGGGCGTCC GGCCCAGGCA GAGCTGGAAA CGGCGCGCGC CGCGCTGGAG
GTGTTGGAAG GGGCATAA
|
|---|
| Protein sequence | MKTPSLDARL EAVLALICAE VHADIGSDHA KLPIRLVREG RVARGVVVEL NPGPLALARR
NVARAGLTHR LEVRAGDGFA PLVPGEVDSA SLTGMGAGTV AGILRRAGDR LPPTLIVQPN
DSPRPLRIWA HEDGYHLTAE RLIPGHWIYP VLQLERRGGP DPAYLGLPLN AALRYGPHLL
QAGSALLRAQ VQADLTRLTP LARPGRPAQA ELETARAALE VLEGA
|
|---|
| |