| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5742 |
|---|
| Symbol | |
|---|
| ID | 8229358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 6897680 |
|---|
| End bp | 6898381 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644933587 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003090095 |
|---|
| Protein GI | 255039474 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0430039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTGA TGAGTTTCAA CATCCGGCAT GGGCTGAACA ACCAGGAGGA GTCGAATCTC
AGGGATATTT TGAGGATAAT TAAGGAAAAT GACCCCGATC TGGTGGCATT ACAAGCGGTG
GACAGCCTCG TGGATAAGGG AAAAGTGCAG TTCCAATTGA GGCAGATCGC CGCGCAAACG
GGCATGTATT ATTCCTACGC CGTGGCCGAT ACCAATGATA ATGGAACGCA GGGACTGGGC
ATACTTTCGA ACTGGCCGAT GGAGAAAACA CAGGTCATTC ACCTGCCCAA AACGCCCGGT
GCCGACCCGA AAGTGCTGCA ATGCGGATTG ATCAAACTGT CGCGCTCGGT TACCTTCCGG
TTTTGCAACT CCCGGCTCGA ATATGCTTCG GTGATGGACC GCGCGTTGCA GGCCGCATAT
ATCAATCAAA TGCTCGTGAA TAGCGTCCAG CCTGTGCTTT TGGGCATGGA TATGGGCGCC
CGACCGAACG AACAGCCTTA TTTTTCGTTC CGCAGAAACT GGCAGGACGC TGCGCGCGGG
TCACAGATGC AGACCTGGAA CGAAGGTTTA CCGGGCGACC GGCTCGATTA CATTTTTGCC
TTGCTCAACA ACAAGGTCCG CATCAAAAAC TACAAAGTGA TCCGAAATTA TCCGGACGTT
TCTGATCACT ATCCCATTCA GGCCACCATT GAATTTTGGT AG
|
|---|
| Protein sequence | MKLMSFNIRH GLNNQEESNL RDILRIIKEN DPDLVALQAV DSLVDKGKVQ FQLRQIAAQT
GMYYSYAVAD TNDNGTQGLG ILSNWPMEKT QVIHLPKTPG ADPKVLQCGL IKLSRSVTFR
FCNSRLEYAS VMDRALQAAY INQMLVNSVQ PVLLGMDMGA RPNEQPYFSF RRNWQDAARG
SQMQTWNEGL PGDRLDYIFA LLNNKVRIKN YKVIRNYPDV SDHYPIQATI EFW
|
|---|
| |