Gene Dfer_5629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5629 
Symbol 
ID8229245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6766003 
End bp6766794 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content55% 
IMG OID644933476 
ProductMethyltransferase type 12 
Protein accessionYP_003089984 
Protein GI255039363 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.879577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.697867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACA GCAGGGAAAA CTGGATCGTT TCGTACCCCG ACGATGGCAA TTCGGTCTGT 
TTTGATATGG AAGACATCTC GTTCTGGTAC CAGCACCGGA ACGAATGCCT CGTAGAAGCG
ATGAAGGCCT GCCAGTTCCC CAAAGACTTT CTGGACATTG GCGGCGGCAA CGGCATCACA
GCCCTCGCCA TGCAGAATGC GGGCTACGAC GTCACCTTGG TGGAACCATA CGCAACCGGC
ATCGAAAACG CCCGGAAGCG CGGAATACGG TCAACCATGC AAAGCACGCT CGAAGATTAT
GTCAAACAAG CTTCGGGAGA GGCCCCGGCG GCCGGCTTTT TCGATGTCAT GGAACACATT
GAGGACGATG CGGCTTTCCT GAAAAATATC AATCTGCTGC TCGCTCCCGG GGGCCAGATC
ATGCTCACGG TGCCGGCATT CAGCAGCCTT TGGTCCGAAA ACGATGTCCA GCTGGGGCAT
TACAGAAGAT ATACCCTGCC CCGGCTCACC GGTTTGCTGG CCAAAGCGGG ATTTGAAGTA
ACCTATCGAA CCTACTTCTT CTCGCTCGTG TGGGCACCGA TGTGGCTGGC ACGCGTGCTG
CCGGAGAAGT TTGGGATTAA AAAGAACAAT ACGCCCGAGA AGAAGCGAAA TGAGCATATG
GCGGGCCGTC CGGCCACAGC GAACCTGCTG CGGAAGTTGC TGAGCTGGGA GGCCAAGGCC
ATTAGGAATA AACGCAGGAT ACCGTTCGGT ACCAGTTGTC TGATCGTAGC ACGTAAAACA
AAAGATTTGT GA
 
Protein sequence
MGNSRENWIV SYPDDGNSVC FDMEDISFWY QHRNECLVEA MKACQFPKDF LDIGGGNGIT 
ALAMQNAGYD VTLVEPYATG IENARKRGIR STMQSTLEDY VKQASGEAPA AGFFDVMEHI
EDDAAFLKNI NLLLAPGGQI MLTVPAFSSL WSENDVQLGH YRRYTLPRLT GLLAKAGFEV
TYRTYFFSLV WAPMWLARVL PEKFGIKKNN TPEKKRNEHM AGRPATANLL RKLLSWEAKA
IRNKRRIPFG TSCLIVARKT KDL