Gene Dfer_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5487 
Symbol 
ID8229102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6618053 
End bp6618862 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content45% 
IMG OID644933334 
Producthypothetical protein 
Protein accessionYP_003089843 
Protein GI255039222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA CCATCCAAAG AATTAAAGAA TTTATTGATA GTCAAGGTTT TACTGTTGCT 
TCATTCGAAA AGCTTGTTGG GTTCTCCAAT GGGTCTTTGG CGAGTCAAAT CAAAAATAAC
AAATCGATAG GCGTCGATAA ATTAGAAAAT ATCGTATCAA AATTCCCTGA GATAAGCCCG
GCATGGCTCC TAAAAGGCGA AGGGCCAATG CTGAGATCGG CCGAATTCGA GATCTCAAAA
AATCCAAAAC CGGCACCAAA TGCTATTCCG ATAAATATTC CTCAGCCAGG CGAAGAAGAA
GATCTAGAAC TAATAAAACG AGAAGATTCG ACGGAATTTC GTCACCTCGG CGATGATCAA
TATTTGGTAA TCTGCCCGCT GGTTGAACAG TATGCTTACG CTGGGTATGT TGCAGGCTGG
TCCGATGCCG TTTACGTGGA TGACCTTCCT CGGCATACTG TTGTAATGAA GAATCTCACG
CTCGGCGTGT ACAGGTCATT CGAGGTGCGC GGGGACAGCA TGGACAATGG CCTTAGGAAA
TCGTTCGCCG ATGGCGACAT ACTTACAGGA CGCAAGCTGT ATCAAAAACA TTGGAGAAGT
AAGCTGCACA TTCACAAGTA TAAGTATTTC ATCCTCGTAA CCATTGACGG AATCCAGATC
AAGGAGATAA TTGACCACAA GGTAGACGAG GGCATCATAG TTTGCCATTC ACTAAATCCC
GACAAGGAAA TGTACCCAGA CTTCGAGCTT TCCCTTGCTG ATGTGCGGGA GATATACTAT
GTTAAGGCCA GAACCGAACC CTTGGATTAA
 
Protein sequence
MAGTIQRIKE FIDSQGFTVA SFEKLVGFSN GSLASQIKNN KSIGVDKLEN IVSKFPEISP 
AWLLKGEGPM LRSAEFEISK NPKPAPNAIP INIPQPGEEE DLELIKREDS TEFRHLGDDQ
YLVICPLVEQ YAYAGYVAGW SDAVYVDDLP RHTVVMKNLT LGVYRSFEVR GDSMDNGLRK
SFADGDILTG RKLYQKHWRS KLHIHKYKYF ILVTIDGIQI KEIIDHKVDE GIIVCHSLNP
DKEMYPDFEL SLADVREIYY VKARTEPLD