| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5444 |
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| Symbol | |
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| ID | 8229055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6568101 |
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| End bp | 6569648 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933288 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003089801 |
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| Protein GI | 255039180 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.408228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA ATCTGGACCT GGCTGAAAGG GAACGGATGT CTTTCCTGCT GGATTTCAGC
CAGGACATCG CCGCGGTGCG CACCAAGGCG GACCTGGAAG CAGCCATTTC CAATGCTTTG
CAGCGCCTGC TGAGCACCCG GCTGGCGATG ATCCGCGTGA TCGGCGACGA TGGCGAAACC
CTGGTGCCCT ACCTTTGGGA TATTTCGCTT TTTTCACGCG TGAAAGGGCT TTTCGACCAG
CTCACGTCCC GCCGCACGAC CGTCACGGAT TACTTTTTCG CACAGGTACT AGCCAGTGCG
GAACCGATCG TTTTTGATAT CGCCGAAGAG GAGCGCAAAG GCAACAGCCC GGAATACATT
TTGTTTTTCA AACAATTGGG CTTGAAGCAA GTGTACGCCT CGGCGCTGCG TGTGGGTGCG
GAGAACCTCG GGACAATGTT CTTCCTCTCG GACTACCTCG ATATCGCCCT GCTTAAAGGA
CTTTGTGCGC AGATTTCCAC CGCGATTTCC AATATTCTGG CCAACGAAAA GATATTGGCT
TACAAGCAGT TGCTCGAAAT CGAGAACGAC CAGCTCAAAG AACAGATCCG GACGATTTAC
AACTTTTCCG AAATCGTAGG AAGCGGACCC GAAATGCAGG AGGTTTACCA CCTGATGTCG
CTCGTGGCCG ACTCGTCGTC GACGGTGCTG CTGCTCGGTG AAACGGGTAC GGGCAAGGAA
CTGATCGCCC GGGCAATCCA CAACACATCG CCCCGCAGGG ACAGGCTGAT GGTGAAGATC
AACTGCGCCG CATTGCCGGC CAACCTGATC GAAAGCGAAT TGTTCGGCCA CGAAAAGGGC
GCGTTCACCG GGGCGGTCGA GCGGCGGATC GGTAAATTCG AGCTGGCCCA CAAAAGCACG
CTTTTCCTGG ACGAAATCGG TGAAATGCCG CTCGAAGCCC AGGTAAAGCT ACTCCGCGTG
TTGCAGGAAA AGGAATTGGA AAGAATAGGC GGGAAAACGA CCGTGAAAGT GGATGTACGC
ATCATAGCAG CCACCAACCG CGACCTGGAA GAAGAAGTGC GCGCCGGGCG CTTTCGCTCC
GACCTCTATT ACCGGCTAAA CGTGTTCCCG ATCACATTGC CGCCTCTCCG CGACCGGCGC
GACGACATTG TCCCGCTGGC GCATTTTTTT ATGAACCGGT ATAGTAAAAA TTCCGGCCGA
AAAGTGACGG GCATAGCGCC CGAAATCATC CGGGAACTGC TGGCATACTC CTGGCCGGGC
AACGTCCGCG AGCTCGAACA CCTCATTGAG CGCACGGTGC TGCTCACAAG GGATCATGTG
ATCCGGCAGA TCCACCTTCC CAAAGAACGT GCGGCGGAAA AAGATTCGCC CGCATTGCCC
AGCCAAACCC TTTCCGAAAT GGAGCGCGCC TACATTATCG ACGTGCTCAG GCAGTTTGAA
GGTAAAATAT CCGGAATGGA CGGCGCTGCG GAATTCCTCG ACATCCCGGC TACGACATTG
CATTCGAAGA TTAAAAAGCT TAAAATCTCC AAGTCGGATT ACTACTGA
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| Protein sequence | MPDNLDLAER ERMSFLLDFS QDIAAVRTKA DLEAAISNAL QRLLSTRLAM IRVIGDDGET
LVPYLWDISL FSRVKGLFDQ LTSRRTTVTD YFFAQVLASA EPIVFDIAEE ERKGNSPEYI
LFFKQLGLKQ VYASALRVGA ENLGTMFFLS DYLDIALLKG LCAQISTAIS NILANEKILA
YKQLLEIEND QLKEQIRTIY NFSEIVGSGP EMQEVYHLMS LVADSSSTVL LLGETGTGKE
LIARAIHNTS PRRDRLMVKI NCAALPANLI ESELFGHEKG AFTGAVERRI GKFELAHKST
LFLDEIGEMP LEAQVKLLRV LQEKELERIG GKTTVKVDVR IIAATNRDLE EEVRAGRFRS
DLYYRLNVFP ITLPPLRDRR DDIVPLAHFF MNRYSKNSGR KVTGIAPEII RELLAYSWPG
NVRELEHLIE RTVLLTRDHV IRQIHLPKER AAEKDSPALP SQTLSEMERA YIIDVLRQFE
GKISGMDGAA EFLDIPATTL HSKIKKLKIS KSDYY
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