| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5420 |
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| Symbol | |
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| ID | 8229031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6542219 |
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| End bp | 6544573 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644933265 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003089778 |
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| Protein GI | 255039157 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0066196 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0691461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA ACTATCTCAA AATCGCATTC AGGAACCTGT TCCGGAACAA AGGCTTTTCA
GCCATCAATA TCCTGGGCCT TTCGGTGGGC ATGGCGAGCG CGCTGCTGAT CCTCTTCTGG
ATGTATAACG AAGTGAGCTA CGACCGCTTC CATACGAAAA AGGATTATTT GTACGAAGCC
TGGAACCGCG GCACTTTCGA TGGCAAGCTG CAATGCTGGA ATTCGACGCC GCAGGTGCTC
GGGCCGGCGT TGAAAGCGGA ATATCCCGAA GTGGCCGACG TGGCGAGGAT TTATTCGCGG
TGGTTTGTGA CGCGTAACGG CGACAAAAAG ATTTCCATCG AAGCAATGAT CACCGATCCG
GCATTCCTGA GCATGTTCGA CTTTCCGCTT TTGCAGGGCA ATCCGGCCAA CGCATTGCAG
TCCGTGAGCT CGATGATCGT AACCCAAAAA ATGGCGATCA GAATGTTCGG TACGGAGGAT
GTTTTAGGCA AAACCATTTC CATCGACAAG GACAATTTCA CGATTACGGG CGTGATGAAG
GACCTGCCGC CCAATACCGA ATTCCGGTTC GATTACATTC TTCCCTGGCA ATACCTGAAA
AAGATCGGCG CGGCCGATGA AAGCTGGTCG TTCAATAACG CGCGAACTTT TGTATGGCTG
AAACCCGCAA CGAATCCCGC ATTGCTTGCC GGCAAAATCA AAGACATTAC CATCCGCCAT
TCCAATCGCG CCGAGGAACA CGAGGTGTTT CTGCACCCGA TCAGCCTCTG GCATTTATAT
TCCAATTTTG AAAACGGCCA GGTCGTCGGC GGGCGGATCG CCATTGTGCG GCTGTTCGGC
GTGATCGCGG CATTCATTTT GCTCATTGCC TGCATCAATT TCATGAACCT AAGCACCGCC
CGGAGCGAAA AACGGGCGAA GGAAGTGGGT ATCCGCAAAA CGGCCGGCGC CAACAAAGGG
CTGCTGGTGG GCCAGTTCAT CGGCGAATCG ATCCTGATCG CGACGGTCGC CGGCGCGATA
GCGCTGCTGG CCGTGTACCT GGTGCTGCCG GCATTCAACA CGCTTACCGG CAAGGAATTG
CATGTCCCGG TAGCCCATCC CGAATTCTGG GGCGCGGCGC TGGCATTCAT TCTTTTCACC
GGCATTGTAG CCGGAAGTTA CCCGGCGTTT TACCTGTCGT CGTTCAAGCC GATCAGCGTG
TTGAAGGGCA CATTCAAAAG GACGCATTCG GCATTCAGCC CGCGGAAAGT ATTGGTAGTC
ATCCAATTCA GCTTCGCTAT TGTGCTCATT ATCTCCACGC TCATCGTCGT AGAACAGATC
CGCCATGCCC AGAACCGCGA CCCGGGCTAT GACCGCGGAC AGGTGGTATA TCACTGGCTC
ACCGGCGACC TCGGCAAAAA TTACGCGCAG ATCAAACGCG AACTGCTGGC AAACAGCATT
GCCACATCGG TTACCAAAAC CGCCTCGCCG CTCAGCAGTG TGGTCGCCGA TACCTGGGGC
ATTGAATGGC AGGGCAAGAA CCCATCCGAA AAAATCGATT TCGATATTTT TACCGAAGAC
GAAGGACTTG TCAAAACTGC CGGGTTGCAG CTCATCCGCG GTCGCGATAT GGATCTCACC
GCATTTCCTT CCGACTCTTC CGCGGCGTTA CTGAACGAAA CTGCCGCCAA GATCATGCGC
TTCAAGGACC CGATCGGGCA GACGATACGG GACAATGGCA AGGCCTATCA GGTGGTGGGC
GTTGTAAAGG ATTTCGTGAT CCGGTCGCCG TACGACAGTC AGGGCCCGCT CATCATTGAA
GGCGCACAGA GTTTTTTCAA TGTAATCCAC ATGAAACTGC ATGCCGGCAA GCCCGCCGCC
GAGCTCATGC CGGCCGTTGA AGCCATTTTC CGCCGCTACA ATCCCGAATA TCCGTTCGAA
TACCATTTCG TGGATGAAGA TTATGCACTG AAATTCGAAG ACACGCGCCG CATTGCTACC
CTGACGGGCC TCTTCGCCGG TCTGACGATC TTCATATCCT GCCTGGGGCT ATTCGGCCTC
GCCGCCTACA TGGCCGAAAA CCGCGTGAAG GAAATCGGCG TGCGCAAAGT GCTGGGCGCC
TCCGTGGTAA GCATTGCTGC CCTGCTTTCC GGCGAGTTTG TGGCACTCGT GCTCGTCTCG
ATCGTGATCG CCGTGCCGGT GGCCTGGTAT GTCATGAACC TCTGGCTGAA CGACTTCGAA
TACCGGATCG GAATCCAATG GTGGACATTT GCGGCATCGG GCGTGCTGGC GGTCGTCGTG
TCATTGCTCA CAGTCAGCTA CCAAGCCATC CGCGCGGCGT TGCTCGATCC GGTGAAAAGC
CTTCGCAGCG AATAA
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| Protein sequence | MLKNYLKIAF RNLFRNKGFS AINILGLSVG MASALLILFW MYNEVSYDRF HTKKDYLYEA
WNRGTFDGKL QCWNSTPQVL GPALKAEYPE VADVARIYSR WFVTRNGDKK ISIEAMITDP
AFLSMFDFPL LQGNPANALQ SVSSMIVTQK MAIRMFGTED VLGKTISIDK DNFTITGVMK
DLPPNTEFRF DYILPWQYLK KIGAADESWS FNNARTFVWL KPATNPALLA GKIKDITIRH
SNRAEEHEVF LHPISLWHLY SNFENGQVVG GRIAIVRLFG VIAAFILLIA CINFMNLSTA
RSEKRAKEVG IRKTAGANKG LLVGQFIGES ILIATVAGAI ALLAVYLVLP AFNTLTGKEL
HVPVAHPEFW GAALAFILFT GIVAGSYPAF YLSSFKPISV LKGTFKRTHS AFSPRKVLVV
IQFSFAIVLI ISTLIVVEQI RHAQNRDPGY DRGQVVYHWL TGDLGKNYAQ IKRELLANSI
ATSVTKTASP LSSVVADTWG IEWQGKNPSE KIDFDIFTED EGLVKTAGLQ LIRGRDMDLT
AFPSDSSAAL LNETAAKIMR FKDPIGQTIR DNGKAYQVVG VVKDFVIRSP YDSQGPLIIE
GAQSFFNVIH MKLHAGKPAA ELMPAVEAIF RRYNPEYPFE YHFVDEDYAL KFEDTRRIAT
LTGLFAGLTI FISCLGLFGL AAYMAENRVK EIGVRKVLGA SVVSIAALLS GEFVALVLVS
IVIAVPVAWY VMNLWLNDFE YRIGIQWWTF AASGVLAVVV SLLTVSYQAI RAALLDPVKS
LRSE
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