Gene Dfer_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5385 
Symbol 
ID8228996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6505803 
End bp6506915 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content53% 
IMG OID644933230 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_003089743 
Protein GI255039122 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA TCTGGCAACA TTCCGAATGG CCTGAGTTCC GGTATAATCT TGCCGACATG 
GACGATATTT TATTCGTTTT CGCCGAAGAA ACGGGGCATA TCAGCGGCAT TTTGAAGGGC
ACAACCAACG CATTGCAGGT AGAAACGCTG ATTAACACGC TCGTTGCCGA GGCGATCAAA
ACGTCGGAGA TCGAAGGGGA ATTTCTGAGC CGGGAAGATG TAGTTTCTTC CATCCGCAAC
AATCTCGGCA TGGCGGGCAA ACCTGAGCCT GTTAAAGACC GGAAGGCGCA GGGAGCAGCG
GAACTGATCG TAACCGCCCG GAATTCCTAT GCGGCACCGC TTACGGAAGC AATGCTTTTT
GACTGGCACC AGACATTACT CAAAGACAGC AAAACCATCG ACACCGGCGC CTGGCGGAAA
GGCATGGCTC CCATGCAGGT CGTTTCAGGT TCGATCGGCA AGGAGAAAGT CCATTTCGAA
GCCCCGCCTT CCGAGCGCGT ACCTGCGGAA ATGGCACAAT TTATCGAGTG GTTTAATGCA
ACGGCGCCGG GAGGATCGAG AGAAATGACC AAAGCGCCTG TGCGTTCGGC TATTGCGCAC
TTGTATTTTG AAACCATCCA CCCTTTCGAG GATGGCAATG GGCGGATTGG ACGGGTAATC
GCGGAAAAGG CATTGTCACA AACACTCGGC CGGCCCGTGA TGCTCAGCCT GTCGCGGACG
ATCGAAGCGG AGCGGAAAAA GTATTACCAT TCACTGGAAA CGGCTCAGAA AAACATCTAC
ATCACCGCCT GGATCGCCTA TTTCGTGCAA ACGATCATCG ACGCGCAGAT CCAGACGCGG
ATTATGCTGG ATTTCACATT GAAGAAAACG CGGTTTTTCG ACCAGTTTAA AAGCCTGCTC
AACGAGCGCG AAACGAAAGT CATCCAGAAA ATGCTCGAAA CCGGTCCGGA CGGGTTCGAA
GGCGGCATGA CGGCGAAGAA ATACATGTCG ATCGCTAAAA CTTCCAAAGC CACCGCCACG
CGGGATTTGC AGCATTTGGC CGAAATCCAG TGCCTGGCCC CTTCCGGCGG CGGGCGCAGC
ACGAGTTATC AGCTGCGCAT TCCTGAAAAT TGA
 
Protein sequence
MNYIWQHSEW PEFRYNLADM DDILFVFAEE TGHISGILKG TTNALQVETL INTLVAEAIK 
TSEIEGEFLS REDVVSSIRN NLGMAGKPEP VKDRKAQGAA ELIVTARNSY AAPLTEAMLF
DWHQTLLKDS KTIDTGAWRK GMAPMQVVSG SIGKEKVHFE APPSERVPAE MAQFIEWFNA
TAPGGSREMT KAPVRSAIAH LYFETIHPFE DGNGRIGRVI AEKALSQTLG RPVMLSLSRT
IEAERKKYYH SLETAQKNIY ITAWIAYFVQ TIIDAQIQTR IMLDFTLKKT RFFDQFKSLL
NERETKVIQK MLETGPDGFE GGMTAKKYMS IAKTSKATAT RDLQHLAEIQ CLAPSGGGRS
TSYQLRIPEN