| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5383 |
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| Symbol | |
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| ID | 8228994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6502183 |
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| End bp | 6504690 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644933228 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003089741 |
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| Protein GI | 255039120 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCA GAAGAGATTT TCTCAGAAAA GCCGCCCTGC TCGCCGGCAC GGGCGCGATG
GCTAATTCAC TCCCGCCCGT TATACAAAAG GCCCTGGCCA TTGACCCGGC GCCCGGCAGC
ACGTTCTACG ACGCCGAGCA TATTGTGTTC CTCATGCAGG AAAACCGCTC GTTCGATCAC
CAGTTGGGCA TGCTGCAGGG CGTCCGCGGC TTCAACGACC CGCGCGCCAT CGACCTCGCC
GATCAAAACA AGGTTTGGTT TCAGACCAAC AAGGCCGGCG ACACGTATGG CCCGTTCCGC
CTGGACGTAA AAGATACCAA AGTGGCCTGG ATGGGCTCCA TTCCGCACGG ATGGACCGAC
CAGACCGACG CCATGAACGA CGGAAAATAC GACCGCTGGC TCGACGTGAA AGCGCCGCGC
AACAAGCAAT ACGCGCACAT TCCGCTCACA ATGGGTTATT GCGACCGCAC CGATTTCCCG
TTCTATTATT CACTTGCCGA CGCATTTACC GTTTGCGACC ACAATTTCTG TTCGAGCATC
ACGGGTACGC ACCCCAACCG CTACTACTGG ATGACCGGCA CGGTACGCGA CAAAAACGAA
CCGTCCGGCA TAGCGCATTT GTGGAACATC AGTAATTACG AATACCCCGA ACTAACCTGG
AAAACATATC CCGAACGCCT TGAAGAAAAC GGCGTCAGCT GGAAGGTTTA CCAGAACGAG
CTTACGATGG GTTACGGCCT CAAAGGCGAG GAAAGTCAGT GGCTGAGCAA CTTCGGCACG
AATGTTCTGG AGTATTTCAA AGCCTACAAC GTGCGTTTCC ATGAAGGCGG GTTCGTGAAT
CTTGAAAACA AGCGGCAAAC GGTCGTGCAG ACGATCGCCG ATCTTGAAAA AGAAGCAGCT
GCCGACCCGC GCGCCGCGAC CCGGCTTGCC GCGGCGAAAA GGCTCCTGAA AAACATTGAA
ACCGCACAAA CGAAGTTCAA TAAGGAAACG CTGGCCAGCC TTTCGGACAA GGATAAAAAA
CTGAACGACA AGGCATTCAC TACAAATAGC AACGACCCGC ATTTCCACGA GCTGACCTCA
ATGGAGTATT CCGACAACGG CACCGGACGG ACGCTGAATG TACCGAAAGG CGATATTTTT
CACCAGTTCC GTGAGGATGT CAAAAATGGG ACGCTGCCCA CGGTTTCGTG GCTGATGTCG
CCTGCGCGCT TTTCGGACCA TCCCGGCGAG CCGTGGTTCG GGCCGTGGTA TGTGAGCGAG
GCGATGGAGA TTTTGCTTCA AAACCCGGAT GTTTGGAAAA AAACGATTTT CATCGTGACC
TACGACGAAA ATGACGGCTA TTTCGACCAT TTACCGCCAT TTACGGTTCC AAATCCCTAC
AAAGAAAACA CCGGAAAAGT CTCTGCGGGC ATTGATCCCA AAATGGATTT CGCATTGGCC
GATCAGCAGA CCAACCCGTC GGCCAACCTG GCCAGTATCC GCGAAGGCTC CATCGGCCTG
GGTTACCGCG TGCCGATGAT CATCGCATCC CCCTGGTCGA GAGGCGGTTA TGTAAATTCA
GAAGTATTTG ACCACACGTC CTCATTGCAG TTCCTGGAAA ACTTCCTTCA AAAGAAGTTC
AACAAGAAAA TCCAGGAAGA AAACATCACC CAATGGCGTC GCACGATCTG CGGCGACCTT
ACGTCTGTTT TCCGGCCCTA CAATGGCGAG AAGATCGAAA AGCCGGTTTT CTTGCAGCAA
AAGCCATTTA TCGAAAGCAT TCACCAGGCG CAATTCAAGC AGGCCCCGGA GAATTTCAGG
AAGCTTGGCG CGGCCGAACT CGCGGAGCTG AATAAAGATC CGCGGAAATC GGCATTGTTC
CCGACGCAGG AAAAAGGCGT GCGCCCGGCT TGCGCATTGC CTTACGAGCC GTTTGTGAAT
GCGCAGCCTG GCAGAACGGC AGGCACATTT GAGCTGACGT TTAAGGCTGG AAATCAGGTT
TTTGGCACAA AATCGAGCGG TATCCCCTTT CGCGTGTATG CGATGAAGCC TTACCGCAAC
GAAAAGCTGC GCTCCTGGGA TTACAGCGTT GCCGCAGGCG ACCAGCTCAC CGACGCATGG
CAACTGGCTG ATTTTGAAAA CAATGCCTAT CACCTCCGCG TGTACGGGCC CAATGGCTTC
TACCGCGAGT TCATGGGCGA TCATGCGAAC CCGAAACTGA AAGTCAGCTG TGAATACGAG
GTAAAATCCT CCAAGCCAAC CGGCAATGTG GTGGTAACGA TCGAAAACCT CGATTTCAGG
ACTCACGACG TGGTAATAGG CGATAATAGT TATAAAACCG GCGTTAAAAA CAAGAAATTC
GCCGTTGGCG GGAAGGCTTC GCTTGTGCTG GACCTGGGCA AATCATTCCA ATGGTACGAT
TTCAGTGTGA AGGCAAAAGG TTATGAAGGT TATGAAGAGC GATTCGCCGG GCATGTGGAA
ACCGGTGCCG TCACGAAAAC CGATCCGCTG ATGGGTGGCG TTGTATAG
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| Protein sequence | MDSRRDFLRK AALLAGTGAM ANSLPPVIQK ALAIDPAPGS TFYDAEHIVF LMQENRSFDH
QLGMLQGVRG FNDPRAIDLA DQNKVWFQTN KAGDTYGPFR LDVKDTKVAW MGSIPHGWTD
QTDAMNDGKY DRWLDVKAPR NKQYAHIPLT MGYCDRTDFP FYYSLADAFT VCDHNFCSSI
TGTHPNRYYW MTGTVRDKNE PSGIAHLWNI SNYEYPELTW KTYPERLEEN GVSWKVYQNE
LTMGYGLKGE ESQWLSNFGT NVLEYFKAYN VRFHEGGFVN LENKRQTVVQ TIADLEKEAA
ADPRAATRLA AAKRLLKNIE TAQTKFNKET LASLSDKDKK LNDKAFTTNS NDPHFHELTS
MEYSDNGTGR TLNVPKGDIF HQFREDVKNG TLPTVSWLMS PARFSDHPGE PWFGPWYVSE
AMEILLQNPD VWKKTIFIVT YDENDGYFDH LPPFTVPNPY KENTGKVSAG IDPKMDFALA
DQQTNPSANL ASIREGSIGL GYRVPMIIAS PWSRGGYVNS EVFDHTSSLQ FLENFLQKKF
NKKIQEENIT QWRRTICGDL TSVFRPYNGE KIEKPVFLQQ KPFIESIHQA QFKQAPENFR
KLGAAELAEL NKDPRKSALF PTQEKGVRPA CALPYEPFVN AQPGRTAGTF ELTFKAGNQV
FGTKSSGIPF RVYAMKPYRN EKLRSWDYSV AAGDQLTDAW QLADFENNAY HLRVYGPNGF
YREFMGDHAN PKLKVSCEYE VKSSKPTGNV VVTIENLDFR THDVVIGDNS YKTGVKNKKF
AVGGKASLVL DLGKSFQWYD FSVKAKGYEG YEERFAGHVE TGAVTKTDPL MGGVV
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