Gene Dfer_5380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5380 
Symbol 
ID8228991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6500956 
End bp6501258 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content47% 
IMG OID644933225 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003089738 
Protein GI255039117 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC CGATCGTGCA GGATCACATC CTTGCAGCAA GCATCCGCAA TGGCGACATA 
CCTTCATTCA CAAGGGTTTA TGAAACCTAC CACGCTTATC TGTTCCGCTT CGCATTACGG
TTTTTAAAGT CCAAAGAACA TGCCGAAGAA GCCGTTCACG ATGTATTCCT GAAATTGTGG
GAAAACCGCG ATTGCCTGAA CAACGAGTCG TCGTTGAAAT GCTACCTGCT CAAAATCTGC
AAAAGCCACA TCTTTCACAT GCTCACGCGA GCGGGAAAAG AACAGGCCGT ACTGCAACTT
TGA
 
Protein sequence
MKEPIVQDHI LAASIRNGDI PSFTRVYETY HAYLFRFALR FLKSKEHAEE AVHDVFLKLW 
ENRDCLNNES SLKCYLLKIC KSHIFHMLTR AGKEQAVLQL