Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5276 |
Symbol | |
ID | 8228887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6368914 |
End bp | 6369951 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644933122 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003089635 |
Protein GI | 255039014 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTC AGATGTCTAT TCTCCGCGAT CTGATCTATG AAGGCGTCGC GCACGGGATC AATTTCCAGC AGCTGTGCCG GAAAGCGGGC GTTACCGTTG CTGACCTCAA TGATTCGGAA CGGATGATCG ATTGGGAATT TGCGCCCAAC CTTTGGGAAG ACATGATGTC GCTGAGCGGC GATGAAATGA TCGGCCTGCA CATGGGTACG CACATGCGCC CGACCAGCTA CGGAATGATC GGCTACCTGC TGCAATCGTG CAAAACGGTG AAGACGGTCA TGGAAATGGT GTGCAAATAC AATGACACAT TCTCAATGAT TTACAAGTAC AATATTGAAT ATCAGGGAGA TCTGGCCGGG TTTTACATGG AGCCGGATGC GCTATGGTCG AACAAATATC CCATCAGTGC ACGGCAGGCG GCCGATATCG GTAAGTCCTC GGCGCTCCAC GTACTCCGGA CGCTCACGGG CCGGAAGATT ACGCCGGTCC GGGCATTGTT TACGCATCAG AGAATCCATC CGCAAGCTTA CCAGAAAGTG CTCGAATGCG AATTGACGTT TAATGCCCCG CGTGACGGCC TGCTTTTTCA CAAGGCCGAT CTGGATATTC CGGTGTTGAG CTATGATGTG TCGCTTTTTG CATTGTTCGA TAAGCTTTTG CAGGAGAAAA AAGAGCGGCT TGCCTCGACG AAGACCTTTG CAGAGGAAAT CAGAATGGCA ATCCTCTCCG GTTTCAAAGG CCAGATCCCG CCGATTGAAG CCATTTCTGC CTACCTCAAT ACCAACACCC GCACATTCCA GCGCCGGCTT TCCGCGGAAG GCAACAACTA CCGTGCGATC TGTAACGAAC TCCGCAAAGA ACTCGCGCTG GCGATGATGG AACGGTCCGA CAAGAGTATT ACCGATATAG CCGAAATGCT CGGTTACGCT GACCATACAA GTTTCAGGCG CGCATTCAAG ACCTGGACCA ATGCCTTACC CGGCGATATC CGCAAAAACA CCGCATCCAG ACGATCGGAA GCGCTGCTTG ACCTTTAA
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Protein sequence | MEFQMSILRD LIYEGVAHGI NFQQLCRKAG VTVADLNDSE RMIDWEFAPN LWEDMMSLSG DEMIGLHMGT HMRPTSYGMI GYLLQSCKTV KTVMEMVCKY NDTFSMIYKY NIEYQGDLAG FYMEPDALWS NKYPISARQA ADIGKSSALH VLRTLTGRKI TPVRALFTHQ RIHPQAYQKV LECELTFNAP RDGLLFHKAD LDIPVLSYDV SLFALFDKLL QEKKERLAST KTFAEEIRMA ILSGFKGQIP PIEAISAYLN TNTRTFQRRL SAEGNNYRAI CNELRKELAL AMMERSDKSI TDIAEMLGYA DHTSFRRAFK TWTNALPGDI RKNTASRRSE ALLDL
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