Gene Dfer_5228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5228 
Symbol 
ID8228839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6306347 
End bp6307045 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content45% 
IMG OID644933078 
Producthypothetical protein 
Protein accessionYP_003089591 
Protein GI255038970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.231846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGTA AATTCAATTT AATACTTCAA GCTAAGGGTG GTGTCGGTAA AAGCCTGCAC 
ACCTATCTGC GAGCCTTGTC TGAAAAGGAC AAAACTTCAC TTTTTGTTGA TCTCGACAGT
TCTACGCAAA CATCAACGCG ACAGCTCGCC TTTCTGGGCG ACGAGCGGTT AGAAACAGTT
TCGTTGATTG ATAATCGCGA TATGCTTGTC CGGGATATTT TTGTCGGGTA TATCGAGAGT
TTAATGGAGG CACCGTACAA TGAAATCTAT TTTGATTTTG GAGCACCAGA GAGTGAACAA
TTTCCTGCGC TTATTTCGCG TGACCTGGAT TTCGAGGAAT GGTGCGAGGA AGTAGATGCC
GAAGCGATAT TCCATATCGT AATTGGTGGC GGTGGAGCGT ACCGCCCAAG TGTCGAATAC
CTACAAAAAA TGATTGAAGT ATTAGGCGAC AAGTTTCGAA TCCTGGTGTG GGAAAATGTT
TTTAGTTTCA GACAATTCCC GAAGCTTTCC GATGAATTAG CCGCCAACTG TGCGGCGCTG
GGTTTGGAGC ATGTAAGGTT TGGCGATTTC GAGGCTAACT CTTTACTGGG TAGCCAGATT
TTAGATGGCA TCAGGAAAGG CTTTCCGTTG GAGAGTTACG GTCCCGGGGC AAGATTGAGA
TTGAAAAAGG AAATCCGTGA AAACTTTTGC CATGACTGA
 
Protein sequence
MRRKFNLILQ AKGGVGKSLH TYLRALSEKD KTSLFVDLDS STQTSTRQLA FLGDERLETV 
SLIDNRDMLV RDIFVGYIES LMEAPYNEIY FDFGAPESEQ FPALISRDLD FEEWCEEVDA
EAIFHIVIGG GGAYRPSVEY LQKMIEVLGD KFRILVWENV FSFRQFPKLS DELAANCAAL
GLEHVRFGDF EANSLLGSQI LDGIRKGFPL ESYGPGARLR LKKEIRENFC HD