Gene Dfer_5170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5170 
Symbol 
ID8228780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6235262 
End bp6236467 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content48% 
IMG OID644933020 
Producthypothetical protein 
Protein accessionYP_003089534 
Protein GI255038913 
COG category[R] General function prediction only 
COG ID[COG3378] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.196201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.530069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA ATCCGGTTTA CCTGCGCATA GGTACCAGTT ACTTTAAGAA AGTCAACCGG 
CCATTATCCT CCGGCGACAC AATTTCCTCT TTGATTCCCT GGTCGGCTGA ATGCATCCGC
CTGGATCACA GCCGTGACTA CTTGAAGGAC CGGGTAGATT GTTACGATGG CTTTTGTTTC
GTCCCGAGCC ATCTGGATTA TCAGCAAAAG GTCGGAGGGT TTTACAACCG CTACCAGTCA
TTCCAACATG AGTCGCGGCA CGGCGATGCC TCGGTGATCT TTCAGTTCCT GAGTCACATT
TTCGGTGAGC AGATCGAGAT GGGTTATGAC TACTTTAAAA TCCTGCTCGA ACGTCCGACC
CAAATCCTTC CAATTTTGTG CCTGGTGAGC GAGGAACGCG GAACCGGAAA GACTACATTC
CTGCATTTTG TCAAATCCAT CTTCGGCGAA AACATGACGA TCAACAGCAA TGAGGATTTC
CGCTCCAATT TCAACATCGA ATGGGCACAG AAACTGGTCA TCGGCGTTGA CGAAACATTC
CTGGATAGAA AGGAGGATTC GGAGCGGATC AAGAATCTTA GCACGGCTCG GTTTTACAAA
GTCGAGGCCA AAGGCCATGA CCGGCAGGAG GTGGAATTCT TCGGGAAATT CATTTTGTGT
AGTAACAACG AAGATCATTT TATCATCGCA GAGCCGGGAG AAATTCGGTA TTGGGTGAGA
AAGGTGCCGC CACTAAAATC AGAGAATCAC CACTTGCTTG CCCAGCTTCG TGCCCAGATC
CCGTTCTTTC TGCATTTCCT GGTGAGCCGT GACTTCGTTC ATCCCAGTAA AACGAGAATG
TGGTTTACAA CTGATCAGAT TGCGACACCT GCATTAAAAA AGCTGCTGAA CCAAAATCGG
AACAAGCTGG AAGTGGAGAT CGCCCATATT CTGCTGACGA TCGCAGACGA AAAGGAGCTG
GACGAAATCC GGTTTTGCAC CGGCGATGTC CAGGACTGGC TCAACAAAAA GCACATCCGT
TTTAAAGACC TCTCACAGAT TAAGCGAATC CTGCAAAATG TCTGGAAGTT GAGCCCGGCA
AGTAATTCAC TGACGTACCC GCAATACAAA TTTTTAACCG ACGGTTCAAT CTTCGAGCAG
ACCGGCAAGG GCAGGTTCTA TACCCTATCC CGAGGGCGCA TAAATGAGCT CAATGATTTG
CCCTAA
 
Protein sequence
MKDNPVYLRI GTSYFKKVNR PLSSGDTISS LIPWSAECIR LDHSRDYLKD RVDCYDGFCF 
VPSHLDYQQK VGGFYNRYQS FQHESRHGDA SVIFQFLSHI FGEQIEMGYD YFKILLERPT
QILPILCLVS EERGTGKTTF LHFVKSIFGE NMTINSNEDF RSNFNIEWAQ KLVIGVDETF
LDRKEDSERI KNLSTARFYK VEAKGHDRQE VEFFGKFILC SNNEDHFIIA EPGEIRYWVR
KVPPLKSENH HLLAQLRAQI PFFLHFLVSR DFVHPSKTRM WFTTDQIATP ALKKLLNQNR
NKLEVEIAHI LLTIADEKEL DEIRFCTGDV QDWLNKKHIR FKDLSQIKRI LQNVWKLSPA
SNSLTYPQYK FLTDGSIFEQ TGKGRFYTLS RGRINELNDL P