| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5150 |
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| Symbol | |
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| ID | 8228759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6218717 |
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| End bp | 6219583 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933000 |
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| Product | TonB family protein |
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| Protein accession | YP_003089515 |
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| Protein GI | 255038894 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.10123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAAA CGGCTGATGC GCAAACCCTC CTGAATCTGA GTGTTGATCA TCAAAATCTA
TTAGCCATGG AAAAATCTTT GAATGACATC GTCTTCGAGA ACCGTAACAA GTCTTACGGC
GCGTACGATC TGAGAAAAGG TTACGGACAG ACCGTTCAGC GGTCGGTGGT GATGGGTGTG
GCGTTCTTTT TAATGCTGGT GATGTTCCCG CAATTGTACG CGAAGCTGAT ACCGGATCCG
AAGCCCGACG ACATTGCGTA CATTGTAGAG GCGAAGCCGG TGGACATTTT AATGGAAGAA
CCGCCGGCCC TGCCTCCTGC CAAAGAGGAA TTGCCTCCGG TGCAGAAGAC AGTGAAATCG
CTCACGCCGG AAGTGCTGCC GGATGAAAAA GTAGAGATAG AGGAGTTGCC GCCGGTGGTA
GATGACCTGA GCAATGCACA GCCATCGACA GAAACCGTGA ACGGGGTGGC GGATCTGGAT
GTGATTGTTC CGCCGGTTGA AAATGCGGTG GCGCCGAAAG CAGAGGCTGC GGGGATCGAG
ATGAAGAAGG AAGAGACATT TACATTTGTG GAGCAGTCGC CACAATATGC AGGAGGAAAT
GAAGCGATGG CGGCTTTCCT GCGCAAAAAC CTGAAATACC CGCGTCCTGC ATCGCAGGCA
GGCGTGCAGG GAAAGGTATT CGTACAATTT ACAGTAGGTT CTGATGGAAA AATAGAGAAT
GCGGCCGCAA TCAAGGGTAT TGGGTTTGGT TGCGATGAAG AGGCGGTGAG AGTAGTGAAG
ATGATGAAAG AGTGGATGCC TGGCAAACAA GCGGGTGTTC CGGTGAGGGT TAGATTCACG
CTGCCGATCG CATTTCAACT GGACTAG
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| Protein sequence | MVKTADAQTL LNLSVDHQNL LAMEKSLNDI VFENRNKSYG AYDLRKGYGQ TVQRSVVMGV
AFFLMLVMFP QLYAKLIPDP KPDDIAYIVE AKPVDILMEE PPALPPAKEE LPPVQKTVKS
LTPEVLPDEK VEIEELPPVV DDLSNAQPST ETVNGVADLD VIVPPVENAV APKAEAAGIE
MKKEETFTFV EQSPQYAGGN EAMAAFLRKN LKYPRPASQA GVQGKVFVQF TVGSDGKIEN
AAAIKGIGFG CDEEAVRVVK MMKEWMPGKQ AGVPVRVRFT LPIAFQLD
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