Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5117 |
Symbol | |
ID | 8228724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6180507 |
End bp | 6181745 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932965 |
Product | peptidase T |
Protein accession | YP_003089482 |
Protein GI | 255038861 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.518942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTG TTCTCGAACG CTTCCTGCGT TATGTGCAAA TAGACACGCA GTCGGACCCT AACTCGGAAA CATTTCCCAG CACTGCCAAG CAGCGTAACC TGAGCAACCT GCTCGCCGAA GAACTTCGCG CGCTGGGCGT TGCGGACGCG CATGTGGACG AGCATGGGTA CGTGTATGCG ACGATCCCGT CGAATTCCGA TAAAGCGGAC ATTCCGGTGA TCTGTTTCTG CTCGCACGTG GACACATCGC CGGACGTTAC CGGCGAAAAT GTGAAGCCGA TCGTTCACCG GAACTGGGAC GGCTCCGACA TAATCCTGCC GGACGATAAC ATGCAGGTTT TGCGGATAGG AGAGCTGCAC GATCTCGACC AGCAGATCGG GAACGACATT GTTACCGCCA GCGGCACCAC ATTGTTGGGC GCTGACAATA AGGCGGGCGT GGCCGAAATC ATGGCCGCGG CCGAACATTT GCTCGCTAAT CCGCAGCTGA AACACGGGGA TATCAAAATC CTCTTCACAC CGGACGAGGA AGTAGGCCGA GGCACCGAAA AAGTCGATTT GCAAAAGCTG GGCGCCGATT TCGGATACAC TGTGGACGGC GAGGCGATCG GGACATTGGA AGATGAAACG TTTTCAGCCG ATGGCGTGAA AATCACCATT CACGGTGTAA GTACGCACCC GGGTTACGCG ATCGGCAAGC TGGAAAATGC ATTGAAAATC GCTGCTGAAA TATTGGCAAG ACTTCCGAAA GACAGACTTT CGCCCGAAAC CACGCAGGAT AAGGAGGGCT TTATTCATCC GGTGCAAATG GAAGGGATTC AGGAAAAAGC AGTGCTGAAC TTCATTATCC GCGATTTTAC CGTTGCAGGC CTGCATGAAA AAGAGGATTT TCTGAAAGGC ATTATGGAAG ATGTTTTGAA AGAATACCCC AATTCGACCG CCGAATTTAA AGTCCAGGAA CAGTACCGGA ACATGAAAGA AGTGCTCGAC CAGCGCCCGG AAGTGATCCA AAACGCATTG ACGGCCATGG AACGGGTAGG TTTAAATCCC ATCCAACGCA GCATCCGCGG AGGCACCGAC GGCTCGCGCC TCTCATTCAT GGGCCTGCCC TGCCCGAACA TCTTCGCCGG CGAACACGCA TTCCACTCCA AGCTGGAATG GGTATCGGTG CAGGATATGG AGAAGGCGGT GGAGGTCATC GTCAGTTTGG CGGGCGTTTG GGAGGAGAAG AAATTTTGA
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Protein sequence | MSSVLERFLR YVQIDTQSDP NSETFPSTAK QRNLSNLLAE ELRALGVADA HVDEHGYVYA TIPSNSDKAD IPVICFCSHV DTSPDVTGEN VKPIVHRNWD GSDIILPDDN MQVLRIGELH DLDQQIGNDI VTASGTTLLG ADNKAGVAEI MAAAEHLLAN PQLKHGDIKI LFTPDEEVGR GTEKVDLQKL GADFGYTVDG EAIGTLEDET FSADGVKITI HGVSTHPGYA IGKLENALKI AAEILARLPK DRLSPETTQD KEGFIHPVQM EGIQEKAVLN FIIRDFTVAG LHEKEDFLKG IMEDVLKEYP NSTAEFKVQE QYRNMKEVLD QRPEVIQNAL TAMERVGLNP IQRSIRGGTD GSRLSFMGLP CPNIFAGEHA FHSKLEWVSV QDMEKAVEVI VSLAGVWEEK KF
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