| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5107 |
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| Symbol | |
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| ID | 8228714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6169435 |
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| End bp | 6171456 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932955 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003089472 |
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| Protein GI | 255038851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0634849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTGA CTTTTAGAAA ATATCTTTTT GGCTTTCTCA CGGCGGTAAT GCCGCTTTCC
GCATCCTGCC AGGAAGTGTT GTGGGCAAAC AAAGTCCTGG GTTACTCGTC CGAATACCGC
CCGTCGCAAA TAGGCCACGC CTACCGTTCC AAACAAATTC TGGGCGTACC GAGCAAGCTC
CCCGATTTCG GTAACAGCCC ATGCGCATGG TCGCCGGCTG ATCCGGACGG TCGCAATGAA
GAGTGGATTA AGGTCGGTTT TGCAAAATCC ATTGCACTGA AACAGATCGC GATTGCTGAA
AACTTCAATC CGGGAGCCAT CGCGCGGGTG TATGCCTACG ATGCTGCGGG CAAGGAATAC
CTCGTGCTGG AAAATCCGGC TGCCCAGCAG GCGGTGAAAG GAAGGATGCT ACGCATTTTC
CCAACCCAAA ACATCCAGGC CAATGCGGTG AAAGTGGTGT TGCAGCCCAA CAAAGTACCG
GGTTTCAACC AGATCGACGC GATCGGTATT TCTTCGGAAA CAGCGCCGAT TGAGGCTAAG
ATCAACTTTA CGGCCACACA GCTGAAAACC CAGAAGGAAA ATATGGGCAA GGCGATCAAC
TCCAAAGGCC AGGAAGTGGC GCCCATTATT TCCCCCGATG GCAAAACGCT TTACTTTACA
CGGAATAATT TCGAAGGCAA TATCGGCTCG CCGTCCCGCC AGGATGTGTG GTACTCGACG
CTCAATGATA AAGGCCAATG GACGGATGCG TTAAATATGG GTTCCCCGAT CAACAATGCA
GGCGACAATG CGATTACGAG CATTTCAGCG GATGGCAAAA CGATTTACCT CATCAATGAA
TACCGCCCCG ACGGCAGCAT GTATTTCGGA TTTTCACGGT CGTTCAAAAC CAAATCGGGC
TGGGGTTTTC CGAAATCTTC CAAAATAACA AACCTGGTGG GGTCGGCGAC GACGATCGAA
ATCACCGTCT CGCCATTCGA AAATGTGCTA ATTATGTCCG TCCAGCGGGC CGATTCGGAG
GGCGGGAAGG ACCTTTACAT TTCATTTCTG CAAAAAGACA ACACGTGGTC CGAGCCGCGG
AACCTGGGCA GCGTGATCAA CACGGCCGAT TACGAGGGGA CGCCGTTCCT CGCATTGGAC
AATAAAACCC TGTACTTCTC TTCACAAGGC CACGCGGGCT ACGGCGAGGG CGACCTGTTC
CTTACCCGCC GCCTGGACGA CACGTGGCTG AACTGGTCGA CGCCCGAAAA CCTCGGACCG
GCCATTAACT CGCCACTCTG GGATGCATTT ATCAACATTC CCGCTACGGG CGATTACGCC
TATTTCAGCG CTAGCGACAA AGTTCTGGGC CAGGAAGATA TATTCCGCAT TCGAATGACG
CCCGAAATCA AGCCGGACCC TGTGGCGGTG GTCAGCGGGA ATGTATTTGA AGCGGAAACA
ACCAAACCGG TCAAATCCGA GATCACAGCG GATTTCAAAA ACAGCAATAA CACTTTCGCC
AAAGCTAATT TCGACCCCGA AACGGGCGAG TACCGGCTCA TACTGCCATT GAAGGAAGTT
TACCGCATTT CGGCATCGGG CGAAGGCTAT TTCCCAGTTT CGGAAGATAT GGACCTGCTC
GGAGACAACG CCTTCCGAAC CATCCGCAAG AACATTTACC TGCACCCGAT CAAAGCCGGG
CAGCAGATCC GACTGAGCAA CACCATGTTT TCCCAAAGCA GCGCGGAAGT GACACCTGCC
TCGCTGGTGG AGTTGGATCG GATTGCCGAG ACGATGCAAA CCTACCCGAC GATGGAAATC
CTACTCGAAG GACATACCGA CAACCAGGGC GAAGTGCAAA AGAATGTGAA GCTCTCGGCC
GATCGCGTGG AGCAGGTCAA AAAATATCTT TTGTCCAAAG GCATTGACGG TCGGCGCATC
CAGACCAAAG CCTGGGGACC GGCGCGGCCC ATCGCCAGCA ACCTCACCGA ACAGACCCGG
CAGAAGAACC GCAGAGTAGA GTTTACAATT CTTAAAATCT AA
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| Protein sequence | MHLTFRKYLF GFLTAVMPLS ASCQEVLWAN KVLGYSSEYR PSQIGHAYRS KQILGVPSKL
PDFGNSPCAW SPADPDGRNE EWIKVGFAKS IALKQIAIAE NFNPGAIARV YAYDAAGKEY
LVLENPAAQQ AVKGRMLRIF PTQNIQANAV KVVLQPNKVP GFNQIDAIGI SSETAPIEAK
INFTATQLKT QKENMGKAIN SKGQEVAPII SPDGKTLYFT RNNFEGNIGS PSRQDVWYST
LNDKGQWTDA LNMGSPINNA GDNAITSISA DGKTIYLINE YRPDGSMYFG FSRSFKTKSG
WGFPKSSKIT NLVGSATTIE ITVSPFENVL IMSVQRADSE GGKDLYISFL QKDNTWSEPR
NLGSVINTAD YEGTPFLALD NKTLYFSSQG HAGYGEGDLF LTRRLDDTWL NWSTPENLGP
AINSPLWDAF INIPATGDYA YFSASDKVLG QEDIFRIRMT PEIKPDPVAV VSGNVFEAET
TKPVKSEITA DFKNSNNTFA KANFDPETGE YRLILPLKEV YRISASGEGY FPVSEDMDLL
GDNAFRTIRK NIYLHPIKAG QQIRLSNTMF SQSSAEVTPA SLVELDRIAE TMQTYPTMEI
LLEGHTDNQG EVQKNVKLSA DRVEQVKKYL LSKGIDGRRI QTKAWGPARP IASNLTEQTR
QKNRRVEFTI LKI
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