Gene Dfer_5096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_5096 
Symbol 
ID8228703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp6153579 
End bp6154727 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content54% 
IMG OID644932944 
Productlipase class 3 
Protein accessionYP_003089461 
Protein GI255038840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000321427 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.30814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TCCTGACGAG TTCAAAACCG TGCCTGCTCA GGCATTTATA CGCGGTAGCA 
GCATTCACAT TCGGCATGCT CGCCGCCCAA ATTGCAAGCG CACAGACGAC AAAACTCAAA
CCCGGTTTCG ACAAAGCCGA ATACCAGGAG CTCATTTACA TGCACTCCCT GCTGTACGAC
ACCACCATGA CCCGCCGCGG AACGTTCCGG GTGCCGCGCC CCACACAATT TGATTCGGTT
TACGCGTCGC CCGTGATGGG CCTCGACAAC CGCTGGGGGC TTTGGCAAAA TAAATCTTCG
GTAGCGGCGA TCAACCTCCG CGGCACCACG ACCAATGCCG TCGGATGGCT GGAAAATTTC
TATGCCGCCA TGGTGCCGGC CAGCGGCGAG CTGCGGATCA GCAACGATTA TACATTTAAA
TACCACCTGG CCGAGAATCC CAAGGCGGCC GTACACATCG GCTGGCTCGT CGGCACGGCT
TACCTCGCCC GGGATATTGT GCCTAAAATC GACTCTTTGT ATAAAAATGG CGTCAGAGAC
TTCCTCATCA TGGGCCACAG CCAGGGCGGC GCGCTCTGCT ACCTTATGAC TGCGCATTTG
TATTCGCTTC AAAAGCAGGG CACATTGCCT GCGGACATCC GCTTCAAAAC TTACGCCAGC
GCGGCGCCGA AAGTAGGCAA CACCTATTTC GCCTATGAAT ATGAGCACCG CGTGGACGGA
GGTTGGGGAT ACAATGTGGT CAATTCGGCC GATTGGGTGC CGGAGGTGCC GTTTACCGTA
CAGACATTGA GTGATTTTAA TCAAACCAAT CCCTTCAAAA ACATCGAAGG TGTGATCAAA
AAGCAAAAAC TGATGGCGCG GATCGGTCTG CGGCACGCTT ACAAGGGTTT GCGGAAACCG
AGCGAAAAGG CGCAAAGCAA TTATGAAAAA TACCTCGGCC GGTATGCGGG GAAAATCGTT
TCCAAAAACC TGCCCGAATA CCAGTCGCCC GCATTCTACA AAAGCAGCAA CTATGTCCGC
ACCGGCCCGA CGGTCGTGCT GCTGGCGGAC GAGGCCTATT ACCAGGAGTT CAAGGATTCG
AATGAGCAGG TATTTGTCCA CCACGGCCTG CAACCCTACC TTCACCTGCT CGAACAATAC
CAGCACTGA
 
Protein sequence
MQTILTSSKP CLLRHLYAVA AFTFGMLAAQ IASAQTTKLK PGFDKAEYQE LIYMHSLLYD 
TTMTRRGTFR VPRPTQFDSV YASPVMGLDN RWGLWQNKSS VAAINLRGTT TNAVGWLENF
YAAMVPASGE LRISNDYTFK YHLAENPKAA VHIGWLVGTA YLARDIVPKI DSLYKNGVRD
FLIMGHSQGG ALCYLMTAHL YSLQKQGTLP ADIRFKTYAS AAPKVGNTYF AYEYEHRVDG
GWGYNVVNSA DWVPEVPFTV QTLSDFNQTN PFKNIEGVIK KQKLMARIGL RHAYKGLRKP
SEKAQSNYEK YLGRYAGKIV SKNLPEYQSP AFYKSSNYVR TGPTVVLLAD EAYYQEFKDS
NEQVFVHHGL QPYLHLLEQY QH