| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5091 |
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| Symbol | |
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| ID | 8228698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6148501 |
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| End bp | 6149280 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644932939 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003089456 |
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| Protein GI | 255038835 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000217016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.274183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATCC CGTTCTACAA ATACCAGGGA ACCGGAAATG ACTTTGTGAT GGTCGACGAC
CGCAATCTGC AATTCCCGGT TTCCAAAGAG CTCATCGCCT CTATTTGCCA CCGCCGGTTC
GGGGTGGGCG CTGATGGCCT CATTCTCCTT CAAAATGCCG AAGGATACGA TTTCCGTATG
GTGTATTTCA ATGCCGACGG CGGCGAGGGC AGCATGTGCG GCAATGGCGG CCGCTGCGTG
GTGCGTTTCG CGAACGACCT CGGGCTTTTT GATGGTAACA CGAAGTTCAT AGCCGTCGAC
GGCGAGCACG AAGCCACTGT AACCGGCGAG GTGATCCGCC TCAAGATGTC GAATGTGAAT
GGCGTGGAGC AATATGAAGA ATACGATTTC ATGAACACCG GCTCGCCGCA TTATGTGACG
TACGTGGACG ATATCCACGA AGCGGATGTG GTAAACATCG GCAGCGAGAT CCGCTACGGC
TCGGTATACG GCCCGAAAGG CGGCACGAAC GTCAATTTCG TGGAGGTGAT CGAAGACAAC
CACCTGAGCG TGCGCACCTA TGAGCGCGGC GTGGAGGACG AAACGTTCTC GTGCGGCACG
GGCGTAACCG CCTGCGCACT ATCCGCCCAC CTGCGCAAAG GCTGGCCCAG CCCGGTAACG
GTGGAAACGA TCGGAGGCAC ATTGGCCGTC GAATACCAGG AAACGGGCGA AGGGCAGTTC
AAAGACATTT ACCTGATCGG CCCCGCGGTG CGTGTGTTCG AAGGAAGTTT GAATGTGTAA
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| Protein sequence | MNIPFYKYQG TGNDFVMVDD RNLQFPVSKE LIASICHRRF GVGADGLILL QNAEGYDFRM
VYFNADGGEG SMCGNGGRCV VRFANDLGLF DGNTKFIAVD GEHEATVTGE VIRLKMSNVN
GVEQYEEYDF MNTGSPHYVT YVDDIHEADV VNIGSEIRYG SVYGPKGGTN VNFVEVIEDN
HLSVRTYERG VEDETFSCGT GVTACALSAH LRKGWPSPVT VETIGGTLAV EYQETGEGQF
KDIYLIGPAV RVFEGSLNV
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