Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_5040 |
Symbol | |
ID | 8228646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 6092985 |
End bp | 6095042 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644932888 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003089405 |
Protein GI | 255038784 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA ACGATAACAA AAGGGGGCCA CTCAACCCTA AAAGTCCTCA GAAGGGATAT CAAGGTTGGA TTATAGCCGC TCTGATCGCT ACTATACTCG GAATCACGTA CCTTAACCGC ACATCAACCA TCCGCGAAAC CACTCAGAAA CGTTTCGAAA AGATGATGGC TGACAAGGAA GTGGAGCGCG TTACCATTGT GAACGACAAA TCGGTGGAAG TAACGCTCAA ACCCGAAGCG CTCAAACTCG ATAAATACAG GGTTGTTGCA AAGGAAAATA ACTATTTCGG CGGCGAAAGT GCCTCGCATT ACCAGTTTCA GGTTACGTCT GCGGAAACCT TTAAGAAGGA TTTCGATAAA ATGCAGGAAG GCACGCCGGA CGACGACAAG GTACCTTTTG TGGTAGATAC CCGCAACGAC TGGACCAGTT TCCTCGGAAC CTGGGGCTTT TTCATTGTCA TGATCCTGGT GATGTACTTC ATTCTCGGCA GAATGTCGGG TGGTGTAGGA CCGGGTGGCC AGATCTTCAA CATCGGCCGC TCACGCGCAA CGCTTTTCGA TGCAGAAAAC AAGGTAAAGA TCACATTTAA TGATGTGGCT GGCCTCGACG AAGCGAAAGA AGAGATCAAG GAAATTGTGG AATACCTGCA AAGCCCCGAC AAATTCAAGA AACTCGGTGC GAAAATTCCC AAAGGTGCAT TGCTCGTAGG ACCTCCGGGA ACGGGTAAAA CATTGCTCGC TAAGGCAGTA GCCGGTGAAG CAGGCGTGCC ATTCTTCTCC CTGTCCGGTT CCGATTTCGT AGAAATGTTC GTGGGTGTGG GTGCAGCGCG TGTGCGTGAC CTCTTTAAAC AAGCGAAAGA AAAAGCGCCT TGTATCATCT TTATCGATGA GATCGACGCA GTAGGTCGTT CACGTGGCCG TGGCGCCATG CCGGGTTCGA ACGACGAACG TGAAAATACA TTGAACTCCC TTTTGGTGGA AATGGACGGT TTCGCAACCG ACTCCGGCAT TATCATCGTG GCAGCCACCA ACCGCCCCGA CGTTCTCGAC CCTGCATTGC TCCGTCCGGG ACGTTTTGAC CGCCAGATTT CCGTAGACAA ACCGGACGTG ATCGGTCGTG AGGCGATTTT CAAAGTGCAT TTGAAGCCAT TGAAACTGGC TACTGACGTT AATATCCAGA AACTTTCATC CCAGACGCCT GGCTTTGCCG GTGCTGAAAT CGCGAACGTT TGTAACGAAG CTGCATTGAT CGCCGCCCGC CGCAACCGCG AAGAGGTAAC CATGCAGGAT TTCCAGGATG CGATGGACCG TGTGATTGGT GGTTTGGAAA AGAAAAACAA ACTCATTTCG CCGGAAGAGA AGCAAATCGT GGCTTACCAC GAGGCAGGTC ACGCAGTGGC AGGCTGGTTC CTGGAACATG CCGATCCATT GGTGAAAGTG TCGATCGTAC CACGTGGTGT GGCGGCATTG GGTTACGCAC AATATCTCCC GCGTGAGCAG TATCTGTACC GTACCGAGCA GCTGTTTGAT GAAATGTGTA TGACATTGGG CGGCCGCGCT GCGGAAGATG TAGTATTCGG CAAAATCTCA ACCGGCGCAT TGAGCGACCT CGAACGCGTG ACGAAAGTGG CGTACAGCAT GGTGACCATG TACGGTATGA ACGAGCGCAT CGGTAATATT TCATTCTACG ATTCGAAACA AACCGATTAT TCATTCACCA AACCTTACTC GGAATCGACG TCGCAGGCGA TTGACGAAGA GGTGAGAAAG CTGGTGGACG AGGCTTACCA GTTTGTTAAA AACCTGCTGA TCGAAAAACG TGACGCATTG GAAGTGTTGG CGAAAGAATT GCTGGAAAAA GAAATCCTGT TCCAGGCAGA TCTCGAAAAA CTGATTGGCA AGCGTCCTTA CGAGAAGGAA ACGAGCTACC AGGCCTATAT CAACCGCCGC TCGAATGAAG AGGCTGCGAT CCACGAAGAA GTGGTGAAAC AGACTTTGGA AAAAGATCGT AAAGAGGAAG AGATGGCAGA GGCGGAAAAA AGCGCCGACA ACGAATAA
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Protein sequence | MSENDNKRGP LNPKSPQKGY QGWIIAALIA TILGITYLNR TSTIRETTQK RFEKMMADKE VERVTIVNDK SVEVTLKPEA LKLDKYRVVA KENNYFGGES ASHYQFQVTS AETFKKDFDK MQEGTPDDDK VPFVVDTRND WTSFLGTWGF FIVMILVMYF ILGRMSGGVG PGGQIFNIGR SRATLFDAEN KVKITFNDVA GLDEAKEEIK EIVEYLQSPD KFKKLGAKIP KGALLVGPPG TGKTLLAKAV AGEAGVPFFS LSGSDFVEMF VGVGAARVRD LFKQAKEKAP CIIFIDEIDA VGRSRGRGAM PGSNDERENT LNSLLVEMDG FATDSGIIIV AATNRPDVLD PALLRPGRFD RQISVDKPDV IGREAIFKVH LKPLKLATDV NIQKLSSQTP GFAGAEIANV CNEAALIAAR RNREEVTMQD FQDAMDRVIG GLEKKNKLIS PEEKQIVAYH EAGHAVAGWF LEHADPLVKV SIVPRGVAAL GYAQYLPREQ YLYRTEQLFD EMCMTLGGRA AEDVVFGKIS TGALSDLERV TKVAYSMVTM YGMNERIGNI SFYDSKQTDY SFTKPYSEST SQAIDEEVRK LVDEAYQFVK NLLIEKRDAL EVLAKELLEK EILFQADLEK LIGKRPYEKE TSYQAYINRR SNEEAAIHEE VVKQTLEKDR KEEEMAEAEK SADNE
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