| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5002 |
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| Symbol | |
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| ID | 8228608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 6052838 |
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| End bp | 6053659 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644932850 |
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| Product | thymidylate synthase |
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| Protein accession | YP_003089367 |
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| Protein GI | 255038746 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000135835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.749841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAT ACCACGACCT GCTGCGCCAT ATCCTGAAAG AGGGCGTCCG AAAAACCGAC
CGCACCGGCA CCGGCACGAT CAGCGTGTTT GGCTACCAAA TGCGTTTCGA CCTCAAAAAG
GGCTTTCCGC TGGTAACGAC CAAGAAAGTG CACACGAAGT CGATCATCCA CGAATTGCTG
TGGTTTTTGC AGGGCGACAC CAATATCGGT TACCTGAAAG AGCACAACGT GTCAATCTGG
GACGAATGGG CGGATGAAAA CGGCGACTTG GGCCCGGTTT ACGGCAAACA ATGGCGGAGC
TGGGCAGGTC CGGACGGGAA GTCCGTCGAC CAGTTGCAGG AGGTTTTGAA ACAACTCAAA
AACTCGCCTG ATTCGCGCCG CATCATCGTA TCGGCCTGGA ATCCGGCCGA GCTGCCGCAG
ATGAAGCTGC ACCCGTGCCA TGCATTGTTC CAGTTTTATG TGGCGCCGCC CGATACCGGG
GCCGGCGAAA CGAATGGCAA GCTTTCCTGC CAGCTCTACC AGCGCAGCGC GGATGTGTTC
CTCGGCGTGC CGTTCAATAT TGCCAGCTAT GCATTGCTCA CAATGATGAT CGCCCGCGAA
TGCGACCTCG ACCTGGGCGA TTTCGTTTGG ACCGGTGGTG ATACGCACAT TTACCTCAAC
CATTTGGAAC AGGTAGAAAC GCAGCTCAGC CGTGAGCCGC GCGCATTGCC GCAAATGATC
CTGAATCCCG GGGTGAAAAA CGTGCTCGAC TTCCGTTACG AGGATTTCGA GCTCGTGAAC
TATAACCCGT GGCCGGGTAT CAAGGCGCCG GTGGCCGTGT AA
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| Protein sequence | MQQYHDLLRH ILKEGVRKTD RTGTGTISVF GYQMRFDLKK GFPLVTTKKV HTKSIIHELL
WFLQGDTNIG YLKEHNVSIW DEWADENGDL GPVYGKQWRS WAGPDGKSVD QLQEVLKQLK
NSPDSRRIIV SAWNPAELPQ MKLHPCHALF QFYVAPPDTG AGETNGKLSC QLYQRSADVF
LGVPFNIASY ALLTMMIARE CDLDLGDFVW TGGDTHIYLN HLEQVETQLS REPRALPQMI
LNPGVKNVLD FRYEDFELVN YNPWPGIKAP VAV
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