Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4979 |
Symbol | |
ID | 8228585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 6022259 |
End bp | 6025555 |
Gene Length | 3297 bp |
Protein Length | 1098 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644932827 |
Product | secreted protein containing FG-GAP repeats |
Protein accession | YP_003089344 |
Protein GI | 255038723 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.55758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAA TTTTACTCCT GGCAATACTT CTTTCAGGCT GCAAAAACGA CGAGACACTT TTCACGCTGC TCGACGCTGG CAAAACCGGC GTCGACTTTA ATAATTACAT TGACGAGGAT GAGGAAAACA ATGTGCTTCG TTACGGGTAT TTCTACAATG GGGGAGGTGT GGCGGCTGCG GATTTCAATA ACGACGGGCT GATCGACCTG TACTTTACAG GCAATATGGT CGCCAACAAG TTATACCTCA ACCGCGGCGA TATGGAGTTT GAAGACGTCT CGGAGCAGTC AGGAACGGGG TTGAATGAGG GATGGAAAAC GGGCGTTTCG CTGGTGGACA TTAACGATGA CGGCTGGATC GACATTTTTG TGAGCCGCGC CGGCGCGCAG GACCCGCGCT TGCGTACGAA GCTGCTGTAC ATCAACAACG GAAAAACGGC GGACGGCATC CCGACCTTCA CCGAAAAAGC AGCCGAATAT GGTCTCAATG ACGCATCTTA CACCACCCAG GCCGTATTTT TCGATTACGA TCGCGACGGT GATACGGACT GCTTCCTGCT CAACCATTCG TTGCAGAAAT ATGCCGGATT CAGTAACCTT CTCGCCGATT ACCGCCAGCA ACGCAACGAG GCCTATGGTA ACAAACTGCT GCGGAACGAC GGCAATCGTT TCACGAACGT CACCGACTTT GCCGGCATCG TGTCCAATGT CCTCAGTTTT GGATTGGGGG TGAATGTAAA TGATTTCAAC AACGACGGTT GGCAGGACCT CTACATTGCC AATGACTATA ATGAAAACGA TTACCTCTAC CTGAACGAGC GAAACGGCAA ATTCAAAGAA GTAATCCGCG AGGCGATGGG GCACGTGTCG CTGTATTCGA TGGGCACCGA CGCCGCCGAC CTGAACAACG ATGGCCTGAT GGATGTGGTG ACGCTGGATA TGCTGCCGAA CTCTAACGAA CGCATCAAAC TGACCTCAGG CGATGACAAC TACGACAAGT ACCAGCAACT CCTGCGGGCC GGTTTCCATG ACCAGAGCAT GCGCAATATG TTGCAGCTCA ATAATGGCGT GAACGCGAAC GGCATTCCGG TTTTTAGCGA AATAGGGCAG CTTGCCGGCA TTTCCAACAC CGATTGGAGC TGGGCCGCAT TAATGGCCGA CTTCGATAAC GACGGCTGGA AAGACATTTT TATCTCGAAC GGCTATGCGC GGGATTATAC CAATATGGAC TTCCTCAAAT ACTCTGCCGA CAAGCAGGTA GAAGGCAACC ACAGCGGCAA TGCGCCAAAG CAAATGGAGA TCATCGCCCA GATGCCGCCT ATCAACGAGC CCGATTACAT TTTCCAAAAC CAGAAGAACC TCACATTCGC GAAAAAGGTA AAAGAATGGG GTTTTGAAAA AGAAAACCAG TCAAACGGCG CTGTGTATGC CGACCTCGAC AACGACGGCG ACCTGGACCT CGTCACCAAC AATGTTGGGC AAAAGGCCTT CATTTACCGG AACAATGCCG GGGAAATGCT GGGTAACAAT GCTTCGCTGC GGGTGAGGCT ATCGTCGCCG AAATATGCTT ACCTGGCCGG CGCGAAAGTG ACCTTGTACA GCGATTCCCT CACACAAACG CAGAACTTCA TCCCCGTTCG CGGCTTCCAG TCGGCGCAAT GGGATGCGCT GCACTTTGGT TTAGGTGGAA AACCGCGGAT CGATTCGCTG GAAGTAACCT GGGCCGACGG CCGCAGGCAG AGCCTGAAAA ACGTGAGTGG TAAGGAAGTC ACGCTCCATT ACACCGATGC CCGCCCCGCG CCCGCCAGCC GGGCCGTGCA GGAGGCATTA TGGGAACCGG CACCGGCCAT CGATTTCACG CACACCGAGG ATGAGCGCAA CGATTTTCGC ATCCAAACCC TGCTGCCCGG CATGCTTACC TACCAGGGAC CGCGTTTAGC ACAAAAAGAC CTGAATGCCG ACGGCACCGA CGACTTTTAC ATCGCAGGTG CCCGCGGCCA GGCGGGGGCA TTGTTCGTCA GTAGCAATGG CACCTTCCGG AAATCCATGC AACCCGCATT CGAGGCCGAT GCCGGATTTG AAGACGCGGA CGCGGTATTT TTCGATGCCG ATGGCGATGG GGACCAGGAT TTGCTCGTGA GCAGCGCCGG TTATGAGTTG AATGCAGATG ACCCGCTGCT TGCGCCAAGG CTGTATTTAA ACAGCCAAAA CATTTTCAAA AAGGCACCGT TCCCGGCTGG CGTGCTCAAT GCGGCGGCAG TGGCAGTGGC CGATGTGGAT GGCGACGGCG ACCTCGATAT TTTTCTCGGC TCGCGTGTTT CGCCCGGCCG CTTTCCCGAA AGTGCGGGAG GGGTATTGCT GATCAATAAC GGAAAAGCGG TGTTTTCGGA CGCAACCGCC AGCCTCGCTC CTCAGCTTCG CAATGCGGGC ATGGTAACCG ATGCCGTGTT TGAAGATTTG AATAAAGACG GCTTCCCCGA GCTGATCCTC ACGACCGACT GGGGGCCGGT GCAGATTTAT GCCAATAACA AAGGAAAACT GGCGAATGCA AGCGAAAAAT GGGGCACCGC AAGTCTCCAC GGCTGCTGGA ATGTGCTCCG GCCGGCTGAT CTCGACGGCG ATGGCGACAC CGATTTTGTA GTAGGTAATA TGGGTGTAAA CTGGCAATGG AATATCACTT CGCCAACAGG TCTGTCGCTC TACGCGGCCG ATTTCGATAA CCTCGATCGC ATCGTGCCCG TCGTGGCCGT GACGGAAGGA GGCAAGGAAT ATCCATATGC AAGCCGCGAC GAACTCCTGG ACCAGGTGCC TTCATTGAAA AAGAAATACA CGGATTATAT CGGCTATTCC AAAGCTACCC TGGCCGACAT GCTACCAGCC GAAAAGTTGA AGACGGCAAA ACGCCTCGAA GCAAGGGAAT ACCGCTCGGG TGTCCTGGAA AATGTGAATG GAAAACTGGT TTTTCACGCC CTGCCCATGG AGGCGCAATT CGCGCCGGTG CATGCGATAC TGGTGCACGA CATGGATGGT GATTGGAAAA AGGACATCGT CTTGGGCGGC AATGCCAGCC AGGCAAGGGT AAGAATGGGC AAAAGCGACG CCAGTCTTTT GCAGGTATTC ACAAACAAAG GCGCATTGAA ATTCCATTAC CTGCCCCAAA AGCAAAGCGG CTTTTATGTA AATGGTGACA TTCGCGACCT GGCCATTGTG AAGGCCAATG CCACGCACTA CCTCGTCGGG GCGATCAACA ACGGGCCGGT GATAACATAC CGTTTCAGGC CCCGTACGGC ATTGTGA
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Protein sequence | MRKILLLAIL LSGCKNDETL FTLLDAGKTG VDFNNYIDED EENNVLRYGY FYNGGGVAAA DFNNDGLIDL YFTGNMVANK LYLNRGDMEF EDVSEQSGTG LNEGWKTGVS LVDINDDGWI DIFVSRAGAQ DPRLRTKLLY INNGKTADGI PTFTEKAAEY GLNDASYTTQ AVFFDYDRDG DTDCFLLNHS LQKYAGFSNL LADYRQQRNE AYGNKLLRND GNRFTNVTDF AGIVSNVLSF GLGVNVNDFN NDGWQDLYIA NDYNENDYLY LNERNGKFKE VIREAMGHVS LYSMGTDAAD LNNDGLMDVV TLDMLPNSNE RIKLTSGDDN YDKYQQLLRA GFHDQSMRNM LQLNNGVNAN GIPVFSEIGQ LAGISNTDWS WAALMADFDN DGWKDIFISN GYARDYTNMD FLKYSADKQV EGNHSGNAPK QMEIIAQMPP INEPDYIFQN QKNLTFAKKV KEWGFEKENQ SNGAVYADLD NDGDLDLVTN NVGQKAFIYR NNAGEMLGNN ASLRVRLSSP KYAYLAGAKV TLYSDSLTQT QNFIPVRGFQ SAQWDALHFG LGGKPRIDSL EVTWADGRRQ SLKNVSGKEV TLHYTDARPA PASRAVQEAL WEPAPAIDFT HTEDERNDFR IQTLLPGMLT YQGPRLAQKD LNADGTDDFY IAGARGQAGA LFVSSNGTFR KSMQPAFEAD AGFEDADAVF FDADGDGDQD LLVSSAGYEL NADDPLLAPR LYLNSQNIFK KAPFPAGVLN AAAVAVADVD GDGDLDIFLG SRVSPGRFPE SAGGVLLINN GKAVFSDATA SLAPQLRNAG MVTDAVFEDL NKDGFPELIL TTDWGPVQIY ANNKGKLANA SEKWGTASLH GCWNVLRPAD LDGDGDTDFV VGNMGVNWQW NITSPTGLSL YAADFDNLDR IVPVVAVTEG GKEYPYASRD ELLDQVPSLK KKYTDYIGYS KATLADMLPA EKLKTAKRLE AREYRSGVLE NVNGKLVFHA LPMEAQFAPV HAILVHDMDG DWKKDIVLGG NASQARVRMG KSDASLLQVF TNKGALKFHY LPQKQSGFYV NGDIRDLAIV KANATHYLVG AINNGPVITY RFRPRTAL
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