| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4947 |
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| Symbol | |
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| ID | 8228553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5979303 |
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| End bp | 5981042 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932795 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003089312 |
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| Protein GI | 255038691 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.993006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCATATCCAA CAGTATGGCG ATCGTCACCC TGGCGATGGC GGTGTTATTC
TCCTGTAAAG AAAGTTTTCT GGAAAAACCG GCTACCGGAG CGGTGAGCGA AGGTCTGCTT
ACCTCAACCA AAGGTCTGGA AGGTGCGCTG ATCGCCGTTT ATGGGCAAAT CAACGGCAAA
GGGGCCGGTG GCCGGATGGC GAGCCCCAGC AACTGGGTTT GGGGAAGTAT ACGCGGCGGT
GATGCCAATA AAGGCACCGA CCCGGGCGAT TACAGCGATA TCAACCCGAT CCAACGGTAC
GAATATCTGA GCACGCAGGG TGTAATCTCC GAAAAATGGG CAGGGAACTA CGAAGGCGTT
TCACGCGCCA ATGCCGTGTT GCGCCTCGTG GCCAAGGCTG ACGCCGAGGT GACCGACGCC
ACCAAGACAC GGATCACTGC CGAATCGCGG TTTTTGCGTG GGCACTACTA CTTCGAGCTG
AAAAAAGCAT TCGGAAATAC GCCTTACGTG GATGAGTCTG TCGACTATGG CTCAGGTATC
GAAAAAGTAA AAAATGACGC CGATCTCTGG CCGAAAATCG AGGCGGATTT TAAATATGCC
TACGATAATC TGCCTGTGAC GCAGGATGCC GTGGGGCGCG CCAACAAATG GGGAGCGGCT
GCATATCTTG CCAAAGCATA CCTGTATCAG AAAAAATTCC CCGAAGCCAA AGCGCTTTTT
GACGTGATCA TTGCCAGCGG ACAAACCACC AATGGCAAAA AATACGCCCT GGTTCCGAAG
TACGCCGATG TGTTCCGTGC GTCGAATGAC AACAATGCGG AGTCCGTATT TGCGGTGCAG
GCGGCGGCCA ACACGGGCAG CGTGAACAAT GCGAACCCCG AGTTTGACCT CAACTGGCCT
TACAATACCG GAGCGAATGG CCCCGGTAAC TGCTGCGGAT TCTTCCAGCC CAGTTTTGAA
ATGGTGAACT CGCACCGCAC CGACGCCAAT GGCCTGCCGC TGCTCAATGG CTCCTATAAT
ACGGACCAAA ATGCCGTAGT GTCCGACATG GGCTTGCTTT CAAAAGATAA ATTCACCCCT
GACGCCGGTA ATCTCGATCC ACGCCTCGAC CATTCGGTGG GCCGTCGGGG GATTCCATTC
CTCGACTGGA TCGACCACCC CGGCGCCGAC TGGATTCGTA ACCAGGCCAA TGGAGGTCCT
TACAGCCCCA AAAAATTCGC CTATTACAAA ACAGACGTGG GCTCGTTGCA GGATAACAGC
TCGTGGACAC CAGGCTACAC GGCGATCAAC TACACGGTGA TCCGCTTTGC CGACGTACTG
CTTATGGCTG CCGAAGCAGA AGTGGAAGCC GGCTCGCTCG AAAAGGCCAG GGAGTATGTG
AATATGGTGC GCACCCGTGC AGCTAATCCG GATGGTTTTG TGAAGAAAGG TGGTGCGCCG
GCAGCGAAAT ATGTAATCAG CAATTATAAA ACCGCATGGA CCGACAAAGA AGCTGCGCGC
ATGGCGGTTC GTTTTGAAAG AAAACTTGAA CTCGCGCTCG AAGGTCACCG TTTCTTCGAC
CTCGTTCGCT GGGGCGTTGC GGACAAGGAT CTCAATGCAT ACCTCACTTA CGAATCGAAA
AAGCTGTCGG GTGCATTGGG TAATGCCAAG TTTGCGGCTA AATATGAATT GCTTCCGATA
CCACAAGGCC AGATCGACCT TCAGGGCGCC GATGTCCTGA AACAAAACCC TGGTTATTAA
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| Protein sequence | MKKIISNSMA IVTLAMAVLF SCKESFLEKP ATGAVSEGLL TSTKGLEGAL IAVYGQINGK
GAGGRMASPS NWVWGSIRGG DANKGTDPGD YSDINPIQRY EYLSTQGVIS EKWAGNYEGV
SRANAVLRLV AKADAEVTDA TKTRITAESR FLRGHYYFEL KKAFGNTPYV DESVDYGSGI
EKVKNDADLW PKIEADFKYA YDNLPVTQDA VGRANKWGAA AYLAKAYLYQ KKFPEAKALF
DVIIASGQTT NGKKYALVPK YADVFRASND NNAESVFAVQ AAANTGSVNN ANPEFDLNWP
YNTGANGPGN CCGFFQPSFE MVNSHRTDAN GLPLLNGSYN TDQNAVVSDM GLLSKDKFTP
DAGNLDPRLD HSVGRRGIPF LDWIDHPGAD WIRNQANGGP YSPKKFAYYK TDVGSLQDNS
SWTPGYTAIN YTVIRFADVL LMAAEAEVEA GSLEKAREYV NMVRTRAANP DGFVKKGGAP
AAKYVISNYK TAWTDKEAAR MAVRFERKLE LALEGHRFFD LVRWGVADKD LNAYLTYESK
KLSGALGNAK FAAKYELLPI PQGQIDLQGA DVLKQNPGY
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