| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4946 |
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| Symbol | |
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| ID | 8228552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5976020 |
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| End bp | 5979253 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644932794 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089311 |
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| Protein GI | 255038690 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA TCTACAAAAA TCCCCGACGG GATTGCTTCG CCTTCCTCCT TCTATTTTTG
ACCGTTTTTA CAGCTAATGC ACAAGATCGA AGGGTCACAG GCGTCGTGTC TGACCCCGCT
GGCACAGGAA TCCCGGGAGC TACTATTCTG ATAAAGGGAA CTCAGATCGG ATCAAATACC
GACGCAGAGG GACGTTTCGC AATCAATGCG CGGTCTGATA ATGATGTACT CGTGATCAGC
TTCGTCGGTT ACAAAACGAA AGAAGTTACG GTAGGCAACC AATCGGTGCT CGACGTCAAG
ATGGAAGACG ACGTTGCTGC GCTGGAAGAA GTGGTTGTAA CCGGCTACAC CACCGATAAG
CGGCGCGAAA CATCCGGTTC GGTGGCGCTT GTAAAGGCCA AGGACCTGAC GGCCGTTCCG
TCCGGTAACG TAGAACAGCA ATTGCAGGGC CGCGTGGCCG GTGTGACGGT GATTACGAAC
GGACAGCCGG GCACTAACAG CCAGATCCGC GTACGCGGTT TCGGGTCTTT TGAAGCAAAT
GAGCCATTGT ACATCGTAGA CGGTGTGCCC GTAGGTTCGA CGGACTTTCT CAATCCCGAC
GACATTGACC AGACCACCGT GTTGAAGGAT GCCGCCGCAG CATCCATCTA CGGTGCGCGG
GCCGCCGCCG GGGTGGTGGT TTATACCACA AAAAAAGGTA CCCGTAACAG GAAACTCAGC
GTCACTTACG ACGGTCTTGT GGGTTTCACC ACGCCCGGGG AAGGTCAGAA AATGATGAAC
CCGACGGACT TCGCCACCTG GACCTGGAAT GCATTCCGCA ACTCGGGCTG GAAGCCGGGT
GATCAGAACT GGACCCACCC GCAATTTGGC ACCGGCGCGC AGCCCGTCAT CCCGGATTAC
CTGATGGTCG GCGGAACGTA TGGTGTTACC GGTAATGTAG ACCTTGCGGC CGAACGTCCC
AAATACAATG TTGATCCAAC GGCCAGAACA GTTTATCAGG TGGTAAAAGC AAACCGGGAG
GGCACCGACT GGTACGATGC CATCACCAGA ACTGCGCCGG TAACCCGGCA TTCGCTCGGC
TTTTCGGGTG GTGGTGAAAA TGGCCGCTAC TTTGTGGGAC TGGGCTTGCA GGATCAGAAA
GGTATTTTGT CGGCCAACAG CTTCAAGCGT TACACTTTCA GGGTTAATAC AGAATTCAAT
ATCCTTAAAA ACCTTCGTTT TGGAGAAAAC ATCCAGGGAA CATACCGGCA AGTGCTGGGT
ATCGGCGGTT TCAATAACGG CCAGGGTGTT GCCAACGACG AAAACGAGAT CCTGAGCGCA
TTCCGGATGC CGTCGATCAT CCCGGTTTAT GACGTCTTCG GCGGCTACGC GGGTACAGCA
GCGAAAGGTT TCAATAACCC CCGCAACCCG GTGGCCACGC GTGACGGTTT GAAGAATAAC
AATGCGTTCA ATGCCAACGG TTTCGGTAAT ATTTACCTGG AATTCGATCC GATTCCGAAC
CTGACTTTGC GTACGAGCGT GGGTGGCCAG TACAACAACT ATACCTATTG GAGCTACTCG
CGCCGCCAGT ATGAAAACTC GGAAAATAAC TCCGCGGTGG GTTATAGCGA GGGTTCGGGA
TTCCGCTTCG CGTGGACGCT CACCAATACC GCGCAATACC GCAAAACATT CGGTCTGCAC
AATTTGGACG TACTCATAGG GCAGGAAGCG CTCAATACCG GCAAAAGCCG CGATTTGCAG
GCGTCCGGTC TGAATCCCTT CTCGACGGAT ATCAATTATG TGAACATGTC GAACGTGTCG
TCCAAAGTGA CTAACAGCCA GCTGGATAAT GGCGTGACTT TCTATTCCTT GTTCGGACGG
TTGAACTACA TCTTCAACGA CCGCTACATT GTATCCGGGG TGTTGCGGCG TGACGGTTCA
TCCCGGTTTG GTGCCGCCAA TCGTTACGGG GTATTTCCGG CGGTGTCGGT TGCGTGGCGG
GTTACATCCG AGAACTTTAT GAAGGGGGCT ACATTCCTCA GTGACCTGAA AATCCGCGGA
GGTTACGGAA CAATGGGTAA TTCCAATGCC GTGCGCCCTG ATAATCAATA TAGCCTTTAC
TCGGCAGGCA TCGGTTCGTC GGCCTATGAC ATTGCCGGTT CCAACACGAG CGCAGCCGAA
GGTTACTATC GCAGCAAACT CGGTAATGCC GACGCAAAAT GGGAAACCAG CGTAACGAAA
AACGTCGGTT TCGATGCGAC GTTTTTCAAT GGCCGACTGG ATGTGATCCT TGATTTGTGG
CAGAAAGACT CCAAGGACTT GCTATTCCAG AAAGGGGTAC CAGCTGTGGT GGGCCCCGGC
GCGACGCCGC CATATGTGAA TGCCGGTACG ATTACCAACA AGGGTATCGA CTTCCAGATC
ATCACCAAAG GCAAATCGGG TAGCAAGCTG GGTTACGAAC TGAATGTGAC GGGTAGCTTG
CTCAGAAATG AAATCGGCGA TCTCGGCGGT GATAAATATC TCGCGGGTAT CAACCCCGGC
TACCGCGGCC TGCAACCGAT CCGCAACCAG CTCGGCTATT CGCTCTCGGC ATTCTATGGT
TATAATGTGA CCGGCTTGTT TCAGACACAG GAAGAAGTGG ACCGCGCGCC TGCGCAGGAT
GGAAAAGGCA TCGGCCGTTT CCGGTATGAA GATGTGAATG GCGACAACCT TATCAATGCC
GATGACCGGA AATACCTGGG CAGTCCGGTA CCCAAATTTA CGGGTGGTTT GAACCTGAAA
CTGACTTATC TGAACTTCGA GGTGGAAACT TATATGTACA CCTCTGTCGG AAACAAGATT
TTCAATGCAT CGAGATGGTT CACCGACTTC TATCCTTCGT TTGCCGGTGC GGCCATCAGC
GAGCGGGTAA AAGACTCCTG GACTCCTCAA AACACGGGCG CAACCATTCC TATATTTGAA
AGCGCCTCCA ATTTCAGCAC CAACACGCAG GCCAACTCTT TCTACGTAGA AAATGGTAAC
TACGTGAGAA TGCAGAACAT TTCTCTGGGT TATAACCTGC CCAAAACCTT GCTCGCAAAA
TTGAGAATGC AGAAGCTGAG ACTTTACGCG TCGGCTAACA ACATTTTCAC AATCTCCAAG
TATTCAGGAC TTGACCCGGG AGTAGGTGGT AATGCCGATA CACAATTCGG GATCGATGTA
GGTAACTATC CTGTCACCAG AAGCTGGGTT TTCGGTGTAA ACCTCGGTTT CTGA
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| Protein sequence | MKIIYKNPRR DCFAFLLLFL TVFTANAQDR RVTGVVSDPA GTGIPGATIL IKGTQIGSNT
DAEGRFAINA RSDNDVLVIS FVGYKTKEVT VGNQSVLDVK MEDDVAALEE VVVTGYTTDK
RRETSGSVAL VKAKDLTAVP SGNVEQQLQG RVAGVTVITN GQPGTNSQIR VRGFGSFEAN
EPLYIVDGVP VGSTDFLNPD DIDQTTVLKD AAAASIYGAR AAAGVVVYTT KKGTRNRKLS
VTYDGLVGFT TPGEGQKMMN PTDFATWTWN AFRNSGWKPG DQNWTHPQFG TGAQPVIPDY
LMVGGTYGVT GNVDLAAERP KYNVDPTART VYQVVKANRE GTDWYDAITR TAPVTRHSLG
FSGGGENGRY FVGLGLQDQK GILSANSFKR YTFRVNTEFN ILKNLRFGEN IQGTYRQVLG
IGGFNNGQGV ANDENEILSA FRMPSIIPVY DVFGGYAGTA AKGFNNPRNP VATRDGLKNN
NAFNANGFGN IYLEFDPIPN LTLRTSVGGQ YNNYTYWSYS RRQYENSENN SAVGYSEGSG
FRFAWTLTNT AQYRKTFGLH NLDVLIGQEA LNTGKSRDLQ ASGLNPFSTD INYVNMSNVS
SKVTNSQLDN GVTFYSLFGR LNYIFNDRYI VSGVLRRDGS SRFGAANRYG VFPAVSVAWR
VTSENFMKGA TFLSDLKIRG GYGTMGNSNA VRPDNQYSLY SAGIGSSAYD IAGSNTSAAE
GYYRSKLGNA DAKWETSVTK NVGFDATFFN GRLDVILDLW QKDSKDLLFQ KGVPAVVGPG
ATPPYVNAGT ITNKGIDFQI ITKGKSGSKL GYELNVTGSL LRNEIGDLGG DKYLAGINPG
YRGLQPIRNQ LGYSLSAFYG YNVTGLFQTQ EEVDRAPAQD GKGIGRFRYE DVNGDNLINA
DDRKYLGSPV PKFTGGLNLK LTYLNFEVET YMYTSVGNKI FNASRWFTDF YPSFAGAAIS
ERVKDSWTPQ NTGATIPIFE SASNFSTNTQ ANSFYVENGN YVRMQNISLG YNLPKTLLAK
LRMQKLRLYA SANNIFTISK YSGLDPGVGG NADTQFGIDV GNYPVTRSWV FGVNLGF
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