Gene Dfer_4936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4936 
Symbol 
ID8228542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5960454 
End bp5960711 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content50% 
IMG OID644932784 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_003089301 
Protein GI255038680 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.336138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAA AAGAAAAAAC CATAGAATTG ATCGAGCAGG CGCTCGAAAC GGTGCGTCCT 
TATCTGCATG CGGATGGCGG TGATGTGAAA TTTGTGGAGC TGACGGACGA CCTGATTGTG
AAGCTTGAAT TGCAAGGTTC CTGCCAAAGC TGCCCGATGA GCGCTATGAC GTTCCGAGCA
GGACTCGAAG AATCGATCCG CAAAGCCGTT CCTTACATTA ATAAGGTAGT TTCCTCCAAC
GTGCCGGAGC TGGCATAA
 
Protein sequence
MDSKEKTIEL IEQALETVRP YLHADGGDVK FVELTDDLIV KLELQGSCQS CPMSAMTFRA 
GLEESIRKAV PYINKVVSSN VPELA