| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4848 |
|---|
| Symbol | |
|---|
| ID | 8228454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5859551 |
|---|
| End bp | 5861965 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644932697 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003089214 |
|---|
| Protein GI | 255038593 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00205753 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.159868 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA ACTATTTCAA AATCGCGCTG CGGAACCTTT GGAAAAGCAA GGGTTATGCA
TTTATCAATG TCGTGGGCCT GGCCGTGGCG TTTTGTGTGA GCGTTTTCCT ATTTCTCACG
GCCTACTTTG CGCTTTCTTA CGACAACTTT CATGCCGACA AGGACAGGAT TTACGAGCCG
TATTTTTTCG CCAACGATCC CGAACGGGTG AACCGCACGG CCTCGATGCC GTTCCCGATC
ACCCCGGCAT TAAAGGCCGA ATATCCTGAG ATTGAAGCCG TCGCACGGGT AGTCAACGGA
TCGGACGTGG TGGAGTACAA GGGCAAGTAT CTGGATAAGA ATATCAAGTT CACCGAGCCC
GATTTCTTCA AAATCTTCTC GTTTCCATTT CTTCAGGGCA ATGCGCAAAC GGCTTTCCAG
GACCTGAGCA GCATTATCAT CACTGAAAAC ATGGCGAAAG CGGTTTTCGG AGCGGAAGAC
CCGATGGGCA AAAGCGTGCA GATAGGGTTG GAGGGGAGTA AAAAGAGCTA CGTCGTCACG
GGCGTGCTGG CGGATTTTCC TGCCAACTCG TCCCTGCAAT TCGATGCATT TTTGCGCAGC
GAGAATGCAG GCGGCTACCA GCAGCAAAAG GACCAGTGGG ACGCATTTTC GCATAATATA
TTCCTGAAAT TGAAACCCGG TGTGGATAAG CTGGCATTTG AACGAAAGCT GAAACCTTTC
ACCGCCAAAT ATTTTGCCGA AACGGTCACG AAGCTTAAAA AGAAAGGTGC AAAGCCCGAC
GAAAGAGGCG ATTTGTATGC ATTGCGCCTG CAAAAACTGG AAGATGTTCA TTTTAACCGT
GAAATATCCG GCGGTAAGGA AGGCTCACTG ATTTATGCGC TGATGGGCAT CGGGCTGTTT
ATTTTGCTTA TCGCTTGTAT CAATTTTATC AACCTGAATG TAGCGCGGTC GTTCATCCGT
GCGCGTGAGG TGGGCGTGCG CAAGTCGCTG GGTGCATTGA AACAGCAGCT TTTCTTCCAG
ATCTGGGGCG AAGCGGGCGT GGTGTGTTTT CTGGGTTTCC TTGCCGGTGT GATACTGGCC
GTCCTGCTTG TGCCGTCGTT CAACGCAACA TTCCGGTCCA AGCTGACGCT GGATTACATT
TTCGAACCCG ACAAAATCGC ATTGCTCGTT GGCCTGTTCC TTTTTGTGAC CCTCATCGCC
GGCGGTTATC CTGCCCTGCA AATGTCGCGG TTCAATGCGG TGCAAGTTTT GAAAGGCAAA
GTATCGCTCA AAAAGCCTGG GATTCTCAGG AATTCGCTGA TTGTGGCACA GTTTGCGCTT
TCGAGCCTGC TTATCTGCTG CACGATCATC GCCATGCAGC AGGTGGATCA CCTGCGTAGC
CAGCCGCTTG GTTTTCAGAA AGAAGAGGTG ATCAGCATTC CGGTCGGCAA CAAGGTCGAC
GGGCAAACTG CGCTGCGCCG GATGAGAAAC CGCCTTGCCG GCGATCCGAA TGTGGTAAGT
GTTACAGGCT CAGGCGTGAA CCTCGGTATG GGCCTCGACA GAAGCAGTTC CCGCAGTTCT
ATTGGTTTTA CATTTAAAGA ACGTGAGATT GAAACCGACT GGCTGCATAT TAGTTATGAT
TATCTCAAAA CATTGAATAT CAAATTAATA GCCGGCCGCG AGTTCAACCC TGCATATCCA
ACCGACTCCA TGGGCCGGGT GATCATCACC GAAAGCATGG CCAAAGCCAT CGGCGAGCAG
GACCCTGTCG GCAAATTCTT TCAGACAGAT ACCGCGGGCA TCAAGCATCA GATCATCGGA
GTGGTGCCGG ATTTTAACCT GTATTCATCC AAAGCCGAAA AGAAACCGGT TACAATGTAC
CTTTCGAATA ACGAAGGCAT CGGCTACATC TTTGTGCGCG TGACGCCGCA GAGCCTGGCC
ACTTCGATGG ATAAGCTGAA AGGCATTTGG AAGGAAATTA CGCCGGAATC GGAGTTTATC
GGGTCGTTCA TCGATGAGAA CACGAACAAC TGGTATATGG AGGAGCAGCG GCTTTCGCAG
ATTTTCAGTC TGGCATCCGC GGTGGCGGTG ATATTGTCCT GCCTGGGGCT GTTTGCAGTA
GCGCTGATCG TCATGGAGCA GCGTACGAAG GAAATCGGTG TGCGCAAAGT GTTGGGCGCG
AGCATCGGCA GCCTGGTGTT CGTACTGTCC CGGGATTTTG TAAAACTGGT GCTCATCGCC
ATTTTGATCT CCACGCCCGC CGCCTGGTAT CTGATGCAAT TGTGGCTCGA TCACTATCCT
TACCGCATTG AAATCAGTCC GCTGGTTTTC GTAGGAGTAG GGTTGGTGGC CGTGCTGGTA
GCCATCGCCA CGGTGAGTTT CCAGAGCATT AAAGCCGCAT TGATGAACCC GGTGAAATCG
CTGCGGAGCG AGTAG
|
|---|
| Protein sequence | MFKNYFKIAL RNLWKSKGYA FINVVGLAVA FCVSVFLFLT AYFALSYDNF HADKDRIYEP
YFFANDPERV NRTASMPFPI TPALKAEYPE IEAVARVVNG SDVVEYKGKY LDKNIKFTEP
DFFKIFSFPF LQGNAQTAFQ DLSSIIITEN MAKAVFGAED PMGKSVQIGL EGSKKSYVVT
GVLADFPANS SLQFDAFLRS ENAGGYQQQK DQWDAFSHNI FLKLKPGVDK LAFERKLKPF
TAKYFAETVT KLKKKGAKPD ERGDLYALRL QKLEDVHFNR EISGGKEGSL IYALMGIGLF
ILLIACINFI NLNVARSFIR AREVGVRKSL GALKQQLFFQ IWGEAGVVCF LGFLAGVILA
VLLVPSFNAT FRSKLTLDYI FEPDKIALLV GLFLFVTLIA GGYPALQMSR FNAVQVLKGK
VSLKKPGILR NSLIVAQFAL SSLLICCTII AMQQVDHLRS QPLGFQKEEV ISIPVGNKVD
GQTALRRMRN RLAGDPNVVS VTGSGVNLGM GLDRSSSRSS IGFTFKEREI ETDWLHISYD
YLKTLNIKLI AGREFNPAYP TDSMGRVIIT ESMAKAIGEQ DPVGKFFQTD TAGIKHQIIG
VVPDFNLYSS KAEKKPVTMY LSNNEGIGYI FVRVTPQSLA TSMDKLKGIW KEITPESEFI
GSFIDENTNN WYMEEQRLSQ IFSLASAVAV ILSCLGLFAV ALIVMEQRTK EIGVRKVLGA
SIGSLVFVLS RDFVKLVLIA ILISTPAAWY LMQLWLDHYP YRIEISPLVF VGVGLVAVLV
AIATVSFQSI KAALMNPVKS LRSE
|
|---|
| |