Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4664 |
Symbol | ileS |
ID | 8228270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5624658 |
End bp | 5628089 |
Gene Length | 3432 bp |
Protein Length | 1143 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644932513 |
Product | isoleucyl-tRNA synthetase |
Protein accession | YP_003089030 |
Protein GI | 255038409 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0060] Isoleucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0311577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATACA ACGAGTATAA AAATCTGAGT TACCCGCAAA TCGGTGACGA AGTACTGAAA TTCTGGAAGG ACAAAAGGAT CTTTGAAGCG TCGGTTGAAA CCCGCGAGGG CGCGCCGACT TTCACATTTT TCGAAGGGCC GCCGTCGGCA AACGGAACGC CGGGCATTCA CCACGTAATG GCCCGGGCGA TCAAGGATAT TTTCTGTCGG TATAAAACGC TGCAAGGCTT CCAGGTGAAG CGCAAGGGCG GCTGGGACAC GCACGGATTG CCGGTGGAGC TGCAAGTGGA GAAGGAACTC GGCATTATCA AGGACGATAT CGGTAAGAAG ATCTCGGTAG CGGATTACAA CGAAAAATGC CGCCAGACGG TGATGAAATT CACCGACCAA TGGAATGACC TGACCGAAAA AATGGGCTAT TGGGTCGATC TCGACGATCC TTACATTACC TACAAAAGCG AATACATTGA AAGCCTCTGG AACCTGCTTA AAAAGCTGTA TGACAAAGGC TTGCTATACA AAGGCTACAC AATCCAGCCT TATTCACCGG CGGCTGGAAC GGGTCTTTCG TCACACGAGC TGAACATGCC CGGGACGTAC AAAGACGTGA AGGACACGAC CATCGTGGCG ATGTTCAAGG TGAAAGAAGC GGCGAAATGG CCTGCATTGG CCGTTTCCGC AGATGAGGAC ATCCGCATTC TCGCCTGGAC CACCACGCCG TGGACGCTTC CCGCGAACTC CGCGCTCACC GTGGGCGGCA ATATTGATTA TGTATTGGTA AAAACCTTCA ATCCTTACAC GCATGAGCCG GTACAGGTAG TGCTCGCAAA GGATCTGGTA GGTAAATATT TCTCCGAAAA AGGCCACGAC GGCGATTTCG ACGGCTATGC GGCCAGCGAC AAAAAGGTGC TTCCGTGGAC TGTCGTAAAT GAGTTCAAAG GCAAAGACCT GGAAGGCATT GAGTATGAGC AGCTGCTTCC TTACATTCAG CCAGAAACAC CCGCATTCCG AGTAATCCTC GGCGACTTTG TGACCACCGA AGACGGTACC GGCGTGGTGC ACACCTCCCC TACTTTCGGT GCGGACGACT TCCGGGTAGC GCAGGCAAAC GGCATCCCGG CCATCATGGT GAAGGACGAA ATTGGCAAAG AAGTGCCGAT TGTAGATCGC CAGGGACGAT TTGTAAAAGA GATCACGGAT TATGCAGGCC GTTTTGTAAA ACCTGAATAC TACTCGCAGG CCGAGCAGGA AGATCCCGAG TTCCGCCCTA CCGACGTGCT CATCGCTATT AAGCTCAAAG AAGAAGGCAA GGCATTTAAA GTAGAAAAAT ACGAGCACCC GTACCCGCAT TGCTGGCGTA CCGACAAGCC GGTGCTTTAC TATCCGCTGG ATAGCTGGTT TATACGCACC ACAGCGGTAA AGGACCGTTT GGTAGAGCTC AACAAAAGCA TCAACTGGAA ACCCGAAAGC ACCGGTACCG GCCGCTTCGG CAACTGGCTC GAAAACCTGG TGGACTGGAA CCTCTCGCGC TCGCGCTACT GGGGAACGCC GCTGCCGATC TGGCGGAACG ATTACGGTGA TGAAGTGTGC GTTGGGTCTA TCGAAGAGCT GAAAGATTTG CTTGAAGAGG CCATTATCTC CGGTCACCTC ACCCGCGAGC AGGCATTGCA CAACTCGGAA TACCTGCAAA AACTGGAACA TGGCGACTAC GACCTGCACC GTCCGTACGT GGATGATGTA GTATTGATAG GTAAAACCGG CCACATCATG CACCGCGAAC CAGACCTGAT CGACGTATGG TTCGACTCTG GCGCGATGCC TTATGCGCAA TGGCATTACC CGTTTGAAAA CCAGGAAATC TTCGACAAGG CTTATCCTGC CGATTTTATT TCGGAAGGTG TAGACCAAAC CCGCGGCTGG TTCTTCACAT TGCACGCCAT TGCAGGAATG CTGTTTGATT CTGTTGCATT CAAAAATGTA GTTTCAACTG GTTTGGTGCT CGACAAGAAT GGCAACAAAA TGTCGAAACG CCTTGGCAAT GCGGTGGACC CGTTTGCGAC ATTGGCGCAG TACGGCCCGG ACGCGACGCG CTGGTACATG ATCACCAATG CAGAGCCTTG GGATAACCTG AAATTTAACA TCGACGGCAT CGGAGAAGTG CAGCGCAAGT TCTTCGGAAC GCTTGTGAAT ACTTATAATT TCTTTGCATT GTATGCCAAT CTCGATGGTT ACGAGTTCCA CGAAGCGAAC TCCGTGCCGA TCGAAAAGCG CACCGAGCTC GACCGGTGGA TTTTGTCCAA ACTGAATACA TTGATTAAGG AAGTAGGTGA GCAATTCGAC GACTACAACC CCACCAAAGC GGGCCGCCTC GTGCAGGATT TCGTGACAGA CCAGCTTTCC AACTGGTACA TCCGCCTCAA CCGCCGCCGT TTCTGGAATC CCTCGGCTGA ACAAGGCGCT GGCCTGACAG AGGATAAAGC GGCTGCTTAT GAGACTTTGC ACCATTGTTT GGTAACTGTT TCACAACTCA TGTCGCCCAT TGCGCCGTTC TTCGGTGAAT GGTTATACAA AAACCTGACA GACAGCGACC GCGAAGCTTC GATCCAGCAC AATGCGCCAT TTAAATATGA CTCAGTGCAT TTGACTTACT GGCCAAAAAT CGAGGCGGAA GTGGTGGATA CCGATCTGGA AGAGGCAATG GAGCTCGCGC AGCGTATCAG CTCACTTGTT CACTCGATCC GGAAGGGGCA TAAGCTGAAA GTCCGTCAGC CATTGTCCAA AATCCTGATC CCGGTTTTGA GTGACAAAAC CAAGCGTCAG ATCGAGCAGG TGGCTTACAT TATCCTTTCC GAGGTAAATG TGAAAAACAT CGAGTTCGTG CACGACGACA GCGGTATTCT GAAAAAGAAA ATCAAACCTA ACTTCAAAAC GCTCGGCCCG AAATTTGGAC CGAAAATGAA GGAGGTAGCG GCCGCCATTT CCGCGATGGA CGAAACGCAG ATCCGCGAAA TCGAAGCCAG CAGCGCCATT ACGCTCACCG CAGCCAGCGG CCCGATCGAA ATCGCATTGA CCGATGTGGA AATCATCGCA GAAGACGTGC CAGGATGGCT CGTAGCGAGT GAAAACGGCC TTACGGTCGC CCTCGACATC ACCGTGACCG AAGACCTGCG CCTTGAAGGC ATCGCCCGCG ATTTCGTGAA CCGCGTGCAG AACCTGCGCA AGGACAGCGG CTTCGAAGTG ACTGACAAGA TCCGCATTAC CTTACAAAAC AACGACGGCC TGCTCGCCAG CGCAGTAACC GCCAACAAAG ATTACATCTG CCAGGAAGTA CAAGCCCTGG ACCTCAACCT CGTAGGCGAC CTGAATGGCG AAGCGACGGA AATTGAGATG GATGAGTTTT TGTTGAAGGT GAAGATTGAG GTGGTTGGCT GA
|
Protein sequence | MKYNEYKNLS YPQIGDEVLK FWKDKRIFEA SVETREGAPT FTFFEGPPSA NGTPGIHHVM ARAIKDIFCR YKTLQGFQVK RKGGWDTHGL PVELQVEKEL GIIKDDIGKK ISVADYNEKC RQTVMKFTDQ WNDLTEKMGY WVDLDDPYIT YKSEYIESLW NLLKKLYDKG LLYKGYTIQP YSPAAGTGLS SHELNMPGTY KDVKDTTIVA MFKVKEAAKW PALAVSADED IRILAWTTTP WTLPANSALT VGGNIDYVLV KTFNPYTHEP VQVVLAKDLV GKYFSEKGHD GDFDGYAASD KKVLPWTVVN EFKGKDLEGI EYEQLLPYIQ PETPAFRVIL GDFVTTEDGT GVVHTSPTFG ADDFRVAQAN GIPAIMVKDE IGKEVPIVDR QGRFVKEITD YAGRFVKPEY YSQAEQEDPE FRPTDVLIAI KLKEEGKAFK VEKYEHPYPH CWRTDKPVLY YPLDSWFIRT TAVKDRLVEL NKSINWKPES TGTGRFGNWL ENLVDWNLSR SRYWGTPLPI WRNDYGDEVC VGSIEELKDL LEEAIISGHL TREQALHNSE YLQKLEHGDY DLHRPYVDDV VLIGKTGHIM HREPDLIDVW FDSGAMPYAQ WHYPFENQEI FDKAYPADFI SEGVDQTRGW FFTLHAIAGM LFDSVAFKNV VSTGLVLDKN GNKMSKRLGN AVDPFATLAQ YGPDATRWYM ITNAEPWDNL KFNIDGIGEV QRKFFGTLVN TYNFFALYAN LDGYEFHEAN SVPIEKRTEL DRWILSKLNT LIKEVGEQFD DYNPTKAGRL VQDFVTDQLS NWYIRLNRRR FWNPSAEQGA GLTEDKAAAY ETLHHCLVTV SQLMSPIAPF FGEWLYKNLT DSDREASIQH NAPFKYDSVH LTYWPKIEAE VVDTDLEEAM ELAQRISSLV HSIRKGHKLK VRQPLSKILI PVLSDKTKRQ IEQVAYIILS EVNVKNIEFV HDDSGILKKK IKPNFKTLGP KFGPKMKEVA AAISAMDETQ IREIEASSAI TLTAASGPIE IALTDVEIIA EDVPGWLVAS ENGLTVALDI TVTEDLRLEG IARDFVNRVQ NLRKDSGFEV TDKIRITLQN NDGLLASAVT ANKDYICQEV QALDLNLVGD LNGEATEIEM DEFLLKVKIE VVG
|
| |