| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4661 |
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| Symbol | |
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| ID | 8228267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5623228 |
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| End bp | 5624007 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932510 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003089027 |
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| Protein GI | 255038406 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0024657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.944766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACTAT CTACCTCCAC ATCCCTCATC ACCGGAGGCG CCTCCGGCCT TGGCGAAGCG
ACTGCGCGAT TATTTGTAAG TCAAGGGTCA AAAGTGGTCA TCCTTGACCT CAACGAAGCA
GCCGGACAGG CACTGGAAAG CCAATTCCCG GATCAAATCA AATTCATCAA AACCGACGTT
ACCAGCGAAA GCGAAGTCCA ACTCGCTTTG GATGCTGCAT TGCTAACTTT TGGCAGCATT
CAGATTGTGG TGAACTGTGC GGGCATCGCG CCGGCGCGAA AGATCGTGGG GAAAGCGGAT
GGCATTTATG GGCCGCATGC TTTTGAGCTT TTTGAAAAAA CCATCCGCAT TAACCTGATG
GGCACATTTA ATGTGATGCG ACTGGCGGCT TTTGCGATGG AAAAGAACGA GCCGAATGCG
GAAGGTGAGC GTGGTGTGAT CATTAATACG GCTTCCGTAG CGGCTTATGA CGGCCAAATG
GGCCAGGTTG CCTATGCTGC CAGCAAAGGC GGCATTGTGA GTATGACGCT GCCGGTGGCG
CGAGACCTCG CGAAATCCGG CATTCGGGTG ATGGCGATTG CGCCGGGGCT GTTCGAAACG
CCGCTGCTCA TGGGCCTGCC CGAAGAAGCG CGCGCTTCAT TGGGGCAGCA GATTCCATTT
CCATCCCGGC TGGGAAAGCC TTCTGAATAT GCATTACTGG CCAAATCTAT TGTGGAAAAC
CCGATGCTGA ACGGCGAGGT GATCCGCTTG GACGGAGCAA TCCGGATGGC TCCCAAATAG
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| Protein sequence | MQLSTSTSLI TGGASGLGEA TARLFVSQGS KVVILDLNEA AGQALESQFP DQIKFIKTDV
TSESEVQLAL DAALLTFGSI QIVVNCAGIA PARKIVGKAD GIYGPHAFEL FEKTIRINLM
GTFNVMRLAA FAMEKNEPNA EGERGVIINT ASVAAYDGQM GQVAYAASKG GIVSMTLPVA
RDLAKSGIRV MAIAPGLFET PLLMGLPEEA RASLGQQIPF PSRLGKPSEY ALLAKSIVEN
PMLNGEVIRL DGAIRMAPK
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