Gene Dfer_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4590 
Symbol 
ID8228196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5543204 
End bp5544331 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content46% 
IMG OID644932439 
Productglycosyl transferase group 1 
Protein accessionYP_003088956 
Protein GI255038335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.947068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA AGAATATACT TCTTCTTGCC CATGACGGAG AAGATTTCTA CAAAGCCAGA 
CTACCTTTTG CATATTTCCT CCGAAATCAA GGCTATAAGG TTTTCGTCAT ACTCCCCAAG
GACAAGTATA CCGACCTCAT TCGTAACGAA GGGTTTGAAG TCCGCAATTC GAGTATTGAA
AGAGATAACA CCAATCCGAT ACAGCTCATC AAGGCCATAT TTGAAATTCG CAATTATGCC
GGCGTATGCA ATGCAGGCAT CGTGCATTCT TTCAAGTTTG TACCTAACCT GATGAACTTC
GGGGCGAATA TCCTGACGCG ACGAAAAACT GTTCTCCATA TTGCGGGCCT GGGGATAGCA
TTTGCCAATC CGGGCTTGAA GTTTAAGCTC TTGAAATGGA TACAGCAAAT CCTGTTTTTC
TTTCAATTTC TCCGGGCCGA CCTGATCATC ATTCAAAATC CGGACGATTA CAAGGACTTC
CTGTTCAAAA AGTATTTCCG CAAAAAGATC AAGGTCGTGA AAGGCAGCGG GGTGGATATT
CAAAAATTCT CCCCCAAGCC GGAATGTCAG CGCTACGAAA CGGATAGGAA GGTTTTTCTG
TGTACTACGC GATTGATTTG GGAAAAAGGA ATACGGGAAA TGGTCGAAGC GTTTGAGACA
TTACCGGATC ACCTTAAATC GCAAGTTGAA CTACGGATTA TCGGAGAACC CGACACGAAG
AACCCGCGGG GCGTCACACC TCAGTACATC GAACAATACA AAACAAGTAC GATCATACGC
TTTCTTGGCA GGCAAGACGG CATTCACGAA CATCTCAGGA ATGCCGACGT GTTCATTCTC
CCCAGCTACT ATCGTGAAGG TATCCCAAGA AGCGTGCTGG AAGCCCTAGC GAGCGGATTG
CCAGTCATTA CCACAGATGT CCCTGGCTGC AACCTGACCA TCATCCCGGA GACAAACGGA
CAGTTAATCC AGCCGCGCTC TGTGGAAACG ATCAGGACTG CTGTAATAGA AATGCTTGCC
GACAAAGAAG CCTGGGGCGG AATGGGAAAA GCAAGTCGTG AGTTGGCAGT ATCAGAATTC
TCTGAGAATA AGATATTTAG TGAGATTGTA AAACTATACG CCCAATGA
 
Protein sequence
MSNKNILLLA HDGEDFYKAR LPFAYFLRNQ GYKVFVILPK DKYTDLIRNE GFEVRNSSIE 
RDNTNPIQLI KAIFEIRNYA GVCNAGIVHS FKFVPNLMNF GANILTRRKT VLHIAGLGIA
FANPGLKFKL LKWIQQILFF FQFLRADLII IQNPDDYKDF LFKKYFRKKI KVVKGSGVDI
QKFSPKPECQ RYETDRKVFL CTTRLIWEKG IREMVEAFET LPDHLKSQVE LRIIGEPDTK
NPRGVTPQYI EQYKTSTIIR FLGRQDGIHE HLRNADVFIL PSYYREGIPR SVLEALASGL
PVITTDVPGC NLTIIPETNG QLIQPRSVET IRTAVIEMLA DKEAWGGMGK ASRELAVSEF
SENKIFSEIV KLYAQ