| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4580 |
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| Symbol | |
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| ID | 8228184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5526334 |
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| End bp | 5529282 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644932427 |
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| Product | Non-specific serine/threonine protein kinase |
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| Protein accession | YP_003088946 |
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| Protein GI | 255038325 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.407175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTT CTCCCGCAGA GCCGTTTAAA ATTGTCTATT CAATTCTTAA CCATGAGTAT
CTGGGGTATA TCTTCGAAGC CTTTGTGGTA CAGCTGACCA GCCAGGGCGA CTTTTCGTTT
CAGATTCAAA ATATTTCTTC CAAAAATATC AAAGAGTTCC GGTCCGGGCT CGATACCCGG
GATTTTGAAC TCGTTAAGCT CATCGACGAC ATCCAGCAGG ATGCCGTTTT GAAAAAATAT
AATCCCAAAA AACTGAATGC GGTCGATTTC TTCCTGAAAG TGTATGACCC GCAAAAAGGC
GACAAGGCCG TTCAGGAGAC GATCGCCGGC TACCTCGAAA ACTGCAAATC GCGCATTCTG
GAAAGGCTGG ATGGGAAAGA GATTTTCATC ATGGGTAACG ATGGCAACCC GCTGTGGAAG
CCCGTTAGCT GGGAGCCCGA AAAGGCGACC ATCCGCTTCC ATTTCATCCG GAATGAGGAT
AATACGCATT ACTTCCCGAC GATCCGCCAC AAAATGCAGA AGCTGGATTT CCAGTACAAA
AATGCATTCC TGATCTGCGA AGATCCCGCC TGGCTCGTGC TGGACGGCCA TTTGTACCAC
TTCGAAGGCA ATGTGGACGG CAAGAAGATC AAACCATTTC TGGCGAAGAA GTTTATCGCC
ATTCCCGGGC AGGTCGAGGA GCAGTATTAT GGCCGCTTTG TGGCGCCGCT CATTGCTTCC
TATGATGTGG TAGCCCGCGG GTTTGAGATC AGAAACGTGT CGTCGGTCCC CAAAACGATC
CTTACGATCT CCGAATATTC AACGGCGAAC CCTAAAAAAT CGACCGTGCT TTTCCAGGAC
AGCGAGGACG TGGAAGTGCT CGAAGAAGAA GACAACGACG TTACATTCGA GCTCTCGTTC
CAATATGCCG GCTTTTCTTT CCATTACGAC AGCTTCGCGC ACGCTTCGAG CGTGCACATG
GAAAAGAGGG GCAATGAGTA TTTTTTCAAT AAGGTTAAAA GAAATATCGA AACCGAAGGC
CAGCATGTCC GGACTTTGAA AGACATGGGC CTTAATATCC GTAACGGGAA GGTCCAGATG
CCGAAATCGG AGGCATTCGG CTGGCTGCAA GGCAATGCGA TCGCGCTCGA TGCGAGCGGA
ATCAGCGTCC GGCAAAACAC CGCCGATGCC AAACGTTATT TCCTCGGCTA TTCGTCACTA
GATATTTCGA TCCAGGAAGG CCGCGATTGG TTCGATATCA ATGCCAAAGT GCGGTTCGGC
GAATTTGAGA TTCCTTTTAT TCAGCTTCGC AACTACATTC TGAACCGGAA AAAGGAATTT
CTGCTTCCCA GCGGTGAAAT AGCCGTCATT CCGGAATGGT GGTTTACCAA ATATTCGGAG
TTCTTTTCAT TCACGGAAAG CAGCCACGAC GACGACGACC AGCTGCGCCT GCGCATGCAT
CATCTCGCAT TGGTTCAGGA GTTAAAAGAG GACAATCTGG CGACAGCGGT GATCAGCCGG
AAGCTCGAAA ACCTTCGCAA TTTCCAGCAA ATAGAGCCCG CAGAGGCCCC CCATCATTTC
CAGGGCATCT TGCGCCCTTA CCAGAAAACG GGTTATGACT GGCTCCGCTT TTTGAAACAA
TACCGGTTTG GCGGCTGTCT GGCCGATGAT ATGGGTTTGG GAAAAACGGT ACAAACGCTC
GCTTTGCTGC AATCGGAAAA GGAAGGTGGC GCCGATCGCC CGTCGATCCT CATCATGCCT
ACTTCACTGC TTTATAATTG GCAGCTCGAA GCGAGCAAAT TCACACCCGA CCTGCGCGTG
CTCTTGTACA CCGGCACGAA CCGCGAGAAG GACACGGCGC AGTTTGATCA CTACGACCTC
ATTTTGACCT CCTACGGCAT TATCAGGCTG GATATCGACC TCATGGAGGA TTACCGGTTC
AATTATGTGA TCCTCGACGA ATCGCAGGCG ATTAAAAACC CGTCGTCGAT CATCACCAAA
GCTGTAAGAC GGCTCAATTC GGCCCACAGG CTTGTTTTGA CGGGCACGCC CATTGAAAAC
AACACACTCG ATCTCTGGTC GCAAATGTCG TTCGTAAACC CGGGATTACT GGGCAGTCAG
ACGTTTTTCA GGGATGAATT TCAGGTTCCG ATCGAAAAGA AAGGCGACGA GGAGAAAACG
AAGAGACTCT ACAATCTCAT CAAGCCATTC ATATTGAGGA GGTTAAAATC GCAGGTTGCG
ACGGATCTTC CCGAGAAAGT GGAGAGCATT CAATACTGTG ACATGTCGGG CGAGCAGGAA
AAAGCGTACG AAGAGGCAAA GGCCTATTAC CGCAACCTCA TCCTGCAAAG CATCGATTCG
GAAGGTATGT CCAAATCCCA GCTGGTGGTG TTACAGGGCC TTACCCGGCT GCGGCAGCTT
GCCAACCACC CGGTCATGGT TGATCCGGAA TATGCACACG ACTCGGGCAA GTTCGAGGAC
GTCCTTTACA AGCTGCAAAC GGTCATGAGC GAAGATCATA AGATATTGAT TTTCAGCCAA
TACATTAAAC ACCTCGACCT TTTCCGGCAT TACCTCGATG AAAAGGAGAT CAACTATGCC
TACCTCGACG GCGCCACGCG TGACCGGCAG GAGCAGGTAG AATCGTTTCA GAACGACGAA
AATATCAAGA TTTTCCTCAT ATCCCTCAAA GCCGGCGGCT TAGGCCTTAA CCTCACCGCG
GCAGACTACG TTTTCATCCT CGATCCGTGG TGGAACCCGG CCATCGAAGC GCAGGCCGTG
GACCGCGCGC ATCGCATTGG CCAGGACCGG ACGGTATTCA CTTATAAGTT TATTACTAAA
AACTCCGTGG AAGAGAAAAT CCTCGCATTG CAGCGCTCCA AAAAGCAGCT GGCGGATGAT
CTGATTTCGA GCGAGGAAGG GTTTATTAAA TCGCTGACGC GGGAGGATGT TTTGAACTTG
TTGTCTTAA
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| Protein sequence | MKVSPAEPFK IVYSILNHEY LGYIFEAFVV QLTSQGDFSF QIQNISSKNI KEFRSGLDTR
DFELVKLIDD IQQDAVLKKY NPKKLNAVDF FLKVYDPQKG DKAVQETIAG YLENCKSRIL
ERLDGKEIFI MGNDGNPLWK PVSWEPEKAT IRFHFIRNED NTHYFPTIRH KMQKLDFQYK
NAFLICEDPA WLVLDGHLYH FEGNVDGKKI KPFLAKKFIA IPGQVEEQYY GRFVAPLIAS
YDVVARGFEI RNVSSVPKTI LTISEYSTAN PKKSTVLFQD SEDVEVLEEE DNDVTFELSF
QYAGFSFHYD SFAHASSVHM EKRGNEYFFN KVKRNIETEG QHVRTLKDMG LNIRNGKVQM
PKSEAFGWLQ GNAIALDASG ISVRQNTADA KRYFLGYSSL DISIQEGRDW FDINAKVRFG
EFEIPFIQLR NYILNRKKEF LLPSGEIAVI PEWWFTKYSE FFSFTESSHD DDDQLRLRMH
HLALVQELKE DNLATAVISR KLENLRNFQQ IEPAEAPHHF QGILRPYQKT GYDWLRFLKQ
YRFGGCLADD MGLGKTVQTL ALLQSEKEGG ADRPSILIMP TSLLYNWQLE ASKFTPDLRV
LLYTGTNREK DTAQFDHYDL ILTSYGIIRL DIDLMEDYRF NYVILDESQA IKNPSSIITK
AVRRLNSAHR LVLTGTPIEN NTLDLWSQMS FVNPGLLGSQ TFFRDEFQVP IEKKGDEEKT
KRLYNLIKPF ILRRLKSQVA TDLPEKVESI QYCDMSGEQE KAYEEAKAYY RNLILQSIDS
EGMSKSQLVV LQGLTRLRQL ANHPVMVDPE YAHDSGKFED VLYKLQTVMS EDHKILIFSQ
YIKHLDLFRH YLDEKEINYA YLDGATRDRQ EQVESFQNDE NIKIFLISLK AGGLGLNLTA
ADYVFILDPW WNPAIEAQAV DRAHRIGQDR TVFTYKFITK NSVEEKILAL QRSKKQLADD
LISSEEGFIK SLTREDVLNL LS
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