Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4577 |
Symbol | |
ID | 8228181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5521952 |
End bp | 5524240 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932424 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_003088943 |
Protein GI | 255038322 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.657251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAAC TGGTTGAATC CCTCAACATT GACCTGGAAC AGGAGCGTAA GGATATCCTC AAAAAATACC GCCGGCTTTT AAGAACAGCT AAGCCATTTT TAAAGGATAA TGATGCTAAA TTAATCAAAA AAGCCTTTTA TACTTCCGTT GACGCGCATA AGGACATGCG CCGCCGGTCG GGAGAGCCAT ATATTTACCA CCCGCTCGCG GTGGCGCAGA TCGTGGTTGA GGAAATCGGG CTGGGTACCA CCGGCATCGT GGCGGCATTG CTGCATGATG TGGTGGAGGA TACCGATATG GGGATCGACG ATATTGAAAG ACTTTTTGGA AAAAAAGTCG CGAAAATTAT CGACGGGCTG ACCAAAATTT CGGGCCGTTT TGAATACGGG TCGTCGCAGC AAGCCGAGAA CTTCCGCAAA ATGCTGCTCA CGCTTTCGGA CGACGTGCGG GTAATCCTCG TCAAGCTCGC GGACCGCCTG CACAACATGC GTACGCTCGA CAGCATGCCG CGCGATAAGC AGCTCAAAAT CGCTTCCGAA ACGATATTCA TCTACGCGCC GCTTGCGCAC AGGCTGGGTT TGTACAGCAT CAAGTCGGAG CTGGAAGAAT TGTATTTGAA ATACACCGAA CCCCAGGAAT ACCGGGCCAT TGCGAGGAAG CTGAGAGAGA CTAAAAATAC CCGTGACCGC TTCATTTCGA AGTTTATGGA GCCGATCGCG CAGGACCTGG AATCGGTGGG GTTGAATTTT ATCCTCAAAG GCCGTCCCAA ATCAATATAC TCGATCTGGA ACAAAATGCG GAAGCAGAGC AAGCCGTTCG AGGAAATATA TGACCTGTTC GCAATCCGCA TTGTGCTCGA ATCGCCGCCG GAAAGCGACC GCGAAAAGGC GATCTGCTGG CAGGCGTATT CCATTGTTAC CGACCATTAT AAGCCCAACC CGGACCGTTT AAAGGACTTT TTGAGCACGC CGCGGGCGAA TGGCTACCAA TCCCTGCACT CCACGGTGAT GAGCAAGAGC GGCCAATGGG TGGAGGTGCA GATCCGCACC TCGCGCATGG ACGAGATCGC CGAGAAGGGT TACGCCGCGC ACTGGAAGTA CAAGGGAAAT GATACCAAGG TGAAAGGTAA TATCGAAACC TGGATCACCC AGGTGCGGGA AACATTGGAG AATGGATTTG GGGACAAAAC GGCCGCTATC GAGTTTCTGG ACGAGTTTCG CAGCAACCTT TTCAATGAGG AGGTATTTGT ATTTACCCCA AAAGGCGAGC TGAAAGTATT GCAGGCAGGT TCAACTGCGC TGGACTTTGC ATTTGACATT CACTCCGAAG TAGGCGCGCA TTGCATGGCC GCCAAAGTGG GCGGTATCCT AGTGCCGATC AGCTATGTGC TAAACAATGG CGATCAGATC GAGATCATCA CGTCCGGCAA GCAGAAGCCG AACGAGGATT GGCTGCGCAT TGTGGTCACT TCCAAAGCCC GGGCGCGGAT CAAGGATTTT CTGAAAGAGG AAAACCGCCG GTACGAAACG GATGGGCGCC AGTTAGTGGA GAAAAAGTTG AAAATACTGG GCGTGGACGC CACCGCGGAG GTAATGAACC AGCTCCGGGC GTTTTTTGAA TGCAAAACGA CGACGGATTT CTTTTACCGC ATCGGCAAAG GCTACATTCC CATCGACGAC CTCAAACGCT TCAAGCGCGA CCGCGATGCG AAGGAGAAAA AGGCCGCCGA GAACGGCGCA GCGAGCAATA CACCGCCCGC AGCCGGCAGC GATGGCAAAA CGCTGACCAA ATATTTGAAA CAAATCCACG GCGACCGTGC AGATAATGAC ATGCTGCTCA TCGGCGACGA TATGGATAAA ATAGATTACA AGCTAGCTCA GTGCTGCAAC CCGATCGCCG GTGACGACGT GTTCGGCTTC GTAACCATCA ACGAAGGCAT TAAAATACAC CGCACCACCT GCCCCAATGC GGCCGAGCTG ATGTCCAAGC ACGGCAACCG CATTATCAAG GCCAAATGGT CGGGTAAGGA AGAGGCGTTC CTGGCGGGGC TGTACCTTTC AGGCACCGAT CGCGTCGGCC TGGTGAACGA TGTCACGCGG ATAATTTCCA ACGAGCTGCA CATCAATATG CGCGGGCTCA CGATCGATAC GAAAGACGGC GTTTTCAACG GCGATATCAA ACTTTATGTG CAGGATACGA GGCACCTGGA CATCCTGATC GCCAAGCTGG AACAGGTGGA AGGCGTGTAC AATGTGCAGC GTTTCGACAC CAACCTGGGC GGCAAGTGA
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Protein sequence | MEQLVESLNI DLEQERKDIL KKYRRLLRTA KPFLKDNDAK LIKKAFYTSV DAHKDMRRRS GEPYIYHPLA VAQIVVEEIG LGTTGIVAAL LHDVVEDTDM GIDDIERLFG KKVAKIIDGL TKISGRFEYG SSQQAENFRK MLLTLSDDVR VILVKLADRL HNMRTLDSMP RDKQLKIASE TIFIYAPLAH RLGLYSIKSE LEELYLKYTE PQEYRAIARK LRETKNTRDR FISKFMEPIA QDLESVGLNF ILKGRPKSIY SIWNKMRKQS KPFEEIYDLF AIRIVLESPP ESDREKAICW QAYSIVTDHY KPNPDRLKDF LSTPRANGYQ SLHSTVMSKS GQWVEVQIRT SRMDEIAEKG YAAHWKYKGN DTKVKGNIET WITQVRETLE NGFGDKTAAI EFLDEFRSNL FNEEVFVFTP KGELKVLQAG STALDFAFDI HSEVGAHCMA AKVGGILVPI SYVLNNGDQI EIITSGKQKP NEDWLRIVVT SKARARIKDF LKEENRRYET DGRQLVEKKL KILGVDATAE VMNQLRAFFE CKTTTDFFYR IGKGYIPIDD LKRFKRDRDA KEKKAAENGA ASNTPPAAGS DGKTLTKYLK QIHGDRADND MLLIGDDMDK IDYKLAQCCN PIAGDDVFGF VTINEGIKIH RTTCPNAAEL MSKHGNRIIK AKWSGKEEAF LAGLYLSGTD RVGLVNDVTR IISNELHINM RGLTIDTKDG VFNGDIKLYV QDTRHLDILI AKLEQVEGVY NVQRFDTNLG GK
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