Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4548 |
Symbol | |
ID | 8228151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5490260 |
End bp | 5492239 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932394 |
Product | hypothetical protein |
Protein accession | YP_003088914 |
Protein GI | 255038293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.546791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.809273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGAC TAGTCTTTGC GATTTTTTTC GGGTTGCTGC TCCTGACGGG TCAGGCAGAA GCGCAGAGAA GGAATAGCGC ACCCAGAAAA ACTTTGATAA CGCCTAAAAA GAAGGCCCCT ACCCCTGCTA AACCCGCTGC GGGCGCCCCG GCCGGCATCA AAGCCGACAG CGTGAAGCAG CAGGCTCCGG CCCTTGCTGC ACCGGCTGCG GACACCACGG TCGCGGACAC TACCATGCCG AGTGCCATTT CGGCTAACGG CGATACGCTC ACAGAAGCGG CATACGAAGC AAAGCTCCCG GTAGAAAAGG CCGATAGCAT ACATGCGTAT AAGATCACTA TCGAAGATAT TTCTTACCTG TCCGTTTGCC CGGGCACCAA TGTTACGATC CCCTTCAAAG CGGAAGGACC GTTTGACGAG GATAATACCT ACATCGTCCA CATTATCGAT GCGACCGGCA AATCGGTACC GATTTCACTT CCGGTGAAGA AAAGTCCGGC TAAGGCGGTG ATCCCTTCTT ATAAAGTTGG CGGGGAAGTA TACCGCCTTC AGATCGTATC GTCCATTCCG GTTGTAAAAA GCCAGGAAGT GCCGCTCAGG CTGCTCCAAG CGCCCGCGGC CAAGATTGAC CTGATCGATG GCACGCAAAC CGTCCGCATT ATGCCGGGGC AGGAAGCACA TTTGCGGGTC AACCTGACCG GCGCCGCACC GTGGTCGTTC CGCCTCTCCG ATAGCACCAC AGTATTACAG ACGCTTTCCA ACCCGCATTA TATTACCGTA AAACCAACCG ACGTGAAGGC GTACCGGGTA ACCGGCGTTT CAAATGCCTG CGGTAGCGGC ACCACTTCGG GCGAAGCGAT CGTGAATGTG AATAACAATC CGGAGCCTAA GCTGGAACTG AAAGAAATCG AAAAGATCGC GAAGCTGTGT GCTGGTGTGC CATTCCAGGT GCCGTTTAAT GCTACGGGTA AATATAAGGA AGGCAACAAA TTCATCGTCC AGATCGCCGA ACGCGGCGGC TCATTCAAGA ATGTATCCAC ACCTGATTCT TCGGGGTACA TTACCACGCA GATTCCCGAT AGCTACAAAC CGGGCGAATA TCGTTTGAGG GTCACGTCAA CGGCTCCCTA CCTGGTAAGC CAAATTGCTA ATATTTCGAT CGTATCGCCA ACCGTAGCGA CGCTTCAGAA AGACTCGCTG CGATTGGGTG AGAATGAATC GGGGCAGCTG ACTGTGAAGT TTACGGGCGG CGGGCCGTGG TTTGTATTGC TTTCAGACGG CACTTACGAG AATAACATCC AGGAATCGCC GCACAAAATC AAAGTCAAGC CTTTTTACGA CACCAACTAC CAGATCACAT CGGCCGGCGG CCTTTGCGGC GTGGGTAAAT TCTCCGGGTC GGCAAAAGTT ACGGTAAAAA GCCCTCCGGC AAGCATTACA CTCGACAGGC TGCCTCAAAA TATGGCCTGC GCCGGTTCTA CCATTGAAAT ACCCTATAAA ACAGAAGGCC GCTACAATCC GAACAACAAA TTTACGGTTC AGATGACCGA CAAATCCGGC CGTTTCGTAT CGCTGCCTAC TACGGTAACC CCTACCGCCA TGCAGGTAAA ACTGGCGGCC GCGGCTCCGG GAGACACTTC GAAAATCCAG AAAATCCGCA TTGTTTCATC ATCGCCGGCG GTTTCGAGCG CCATTGAAGA GCTGGAAATA ATCGCTCCCG ACAAAGCCGT TGCGGAAGTT TCGGGAAAAG GCACGATTTC GGCGGGACGT TCCACACGCA TTCAGCTAAG ATTTAAAAAT GGCCTTCCGC CCTGGTCGTT CACACTTTCC GACGGCACGG CAATCAACGG TACATTCCTG AATCCGTATC TGATTTCCGT TTCTCCGGCC ACTTCGACAG AATATACCAT TAGTTCGCTT AAAAGCGGCT GCGGCACGGG CACAGGGCGC GGCGCCGCTA TGGTGACGGT AGAAAACTAA
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Protein sequence | MYRLVFAIFF GLLLLTGQAE AQRRNSAPRK TLITPKKKAP TPAKPAAGAP AGIKADSVKQ QAPALAAPAA DTTVADTTMP SAISANGDTL TEAAYEAKLP VEKADSIHAY KITIEDISYL SVCPGTNVTI PFKAEGPFDE DNTYIVHIID ATGKSVPISL PVKKSPAKAV IPSYKVGGEV YRLQIVSSIP VVKSQEVPLR LLQAPAAKID LIDGTQTVRI MPGQEAHLRV NLTGAAPWSF RLSDSTTVLQ TLSNPHYITV KPTDVKAYRV TGVSNACGSG TTSGEAIVNV NNNPEPKLEL KEIEKIAKLC AGVPFQVPFN ATGKYKEGNK FIVQIAERGG SFKNVSTPDS SGYITTQIPD SYKPGEYRLR VTSTAPYLVS QIANISIVSP TVATLQKDSL RLGENESGQL TVKFTGGGPW FVLLSDGTYE NNIQESPHKI KVKPFYDTNY QITSAGGLCG VGKFSGSAKV TVKSPPASIT LDRLPQNMAC AGSTIEIPYK TEGRYNPNNK FTVQMTDKSG RFVSLPTTVT PTAMQVKLAA AAPGDTSKIQ KIRIVSSSPA VSSAIEELEI IAPDKAVAEV SGKGTISAGR STRIQLRFKN GLPPWSFTLS DGTAINGTFL NPYLISVSPA TSTEYTISSL KSGCGTGTGR GAAMVTVEN
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