Gene Dfer_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4548 
Symbol 
ID8228151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5490260 
End bp5492239 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content53% 
IMG OID644932394 
Producthypothetical protein 
Protein accessionYP_003088914 
Protein GI255038293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.546791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.809273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGAC TAGTCTTTGC GATTTTTTTC GGGTTGCTGC TCCTGACGGG TCAGGCAGAA 
GCGCAGAGAA GGAATAGCGC ACCCAGAAAA ACTTTGATAA CGCCTAAAAA GAAGGCCCCT
ACCCCTGCTA AACCCGCTGC GGGCGCCCCG GCCGGCATCA AAGCCGACAG CGTGAAGCAG
CAGGCTCCGG CCCTTGCTGC ACCGGCTGCG GACACCACGG TCGCGGACAC TACCATGCCG
AGTGCCATTT CGGCTAACGG CGATACGCTC ACAGAAGCGG CATACGAAGC AAAGCTCCCG
GTAGAAAAGG CCGATAGCAT ACATGCGTAT AAGATCACTA TCGAAGATAT TTCTTACCTG
TCCGTTTGCC CGGGCACCAA TGTTACGATC CCCTTCAAAG CGGAAGGACC GTTTGACGAG
GATAATACCT ACATCGTCCA CATTATCGAT GCGACCGGCA AATCGGTACC GATTTCACTT
CCGGTGAAGA AAAGTCCGGC TAAGGCGGTG ATCCCTTCTT ATAAAGTTGG CGGGGAAGTA
TACCGCCTTC AGATCGTATC GTCCATTCCG GTTGTAAAAA GCCAGGAAGT GCCGCTCAGG
CTGCTCCAAG CGCCCGCGGC CAAGATTGAC CTGATCGATG GCACGCAAAC CGTCCGCATT
ATGCCGGGGC AGGAAGCACA TTTGCGGGTC AACCTGACCG GCGCCGCACC GTGGTCGTTC
CGCCTCTCCG ATAGCACCAC AGTATTACAG ACGCTTTCCA ACCCGCATTA TATTACCGTA
AAACCAACCG ACGTGAAGGC GTACCGGGTA ACCGGCGTTT CAAATGCCTG CGGTAGCGGC
ACCACTTCGG GCGAAGCGAT CGTGAATGTG AATAACAATC CGGAGCCTAA GCTGGAACTG
AAAGAAATCG AAAAGATCGC GAAGCTGTGT GCTGGTGTGC CATTCCAGGT GCCGTTTAAT
GCTACGGGTA AATATAAGGA AGGCAACAAA TTCATCGTCC AGATCGCCGA ACGCGGCGGC
TCATTCAAGA ATGTATCCAC ACCTGATTCT TCGGGGTACA TTACCACGCA GATTCCCGAT
AGCTACAAAC CGGGCGAATA TCGTTTGAGG GTCACGTCAA CGGCTCCCTA CCTGGTAAGC
CAAATTGCTA ATATTTCGAT CGTATCGCCA ACCGTAGCGA CGCTTCAGAA AGACTCGCTG
CGATTGGGTG AGAATGAATC GGGGCAGCTG ACTGTGAAGT TTACGGGCGG CGGGCCGTGG
TTTGTATTGC TTTCAGACGG CACTTACGAG AATAACATCC AGGAATCGCC GCACAAAATC
AAAGTCAAGC CTTTTTACGA CACCAACTAC CAGATCACAT CGGCCGGCGG CCTTTGCGGC
GTGGGTAAAT TCTCCGGGTC GGCAAAAGTT ACGGTAAAAA GCCCTCCGGC AAGCATTACA
CTCGACAGGC TGCCTCAAAA TATGGCCTGC GCCGGTTCTA CCATTGAAAT ACCCTATAAA
ACAGAAGGCC GCTACAATCC GAACAACAAA TTTACGGTTC AGATGACCGA CAAATCCGGC
CGTTTCGTAT CGCTGCCTAC TACGGTAACC CCTACCGCCA TGCAGGTAAA ACTGGCGGCC
GCGGCTCCGG GAGACACTTC GAAAATCCAG AAAATCCGCA TTGTTTCATC ATCGCCGGCG
GTTTCGAGCG CCATTGAAGA GCTGGAAATA ATCGCTCCCG ACAAAGCCGT TGCGGAAGTT
TCGGGAAAAG GCACGATTTC GGCGGGACGT TCCACACGCA TTCAGCTAAG ATTTAAAAAT
GGCCTTCCGC CCTGGTCGTT CACACTTTCC GACGGCACGG CAATCAACGG TACATTCCTG
AATCCGTATC TGATTTCCGT TTCTCCGGCC ACTTCGACAG AATATACCAT TAGTTCGCTT
AAAAGCGGCT GCGGCACGGG CACAGGGCGC GGCGCCGCTA TGGTGACGGT AGAAAACTAA
 
Protein sequence
MYRLVFAIFF GLLLLTGQAE AQRRNSAPRK TLITPKKKAP TPAKPAAGAP AGIKADSVKQ 
QAPALAAPAA DTTVADTTMP SAISANGDTL TEAAYEAKLP VEKADSIHAY KITIEDISYL
SVCPGTNVTI PFKAEGPFDE DNTYIVHIID ATGKSVPISL PVKKSPAKAV IPSYKVGGEV
YRLQIVSSIP VVKSQEVPLR LLQAPAAKID LIDGTQTVRI MPGQEAHLRV NLTGAAPWSF
RLSDSTTVLQ TLSNPHYITV KPTDVKAYRV TGVSNACGSG TTSGEAIVNV NNNPEPKLEL
KEIEKIAKLC AGVPFQVPFN ATGKYKEGNK FIVQIAERGG SFKNVSTPDS SGYITTQIPD
SYKPGEYRLR VTSTAPYLVS QIANISIVSP TVATLQKDSL RLGENESGQL TVKFTGGGPW
FVLLSDGTYE NNIQESPHKI KVKPFYDTNY QITSAGGLCG VGKFSGSAKV TVKSPPASIT
LDRLPQNMAC AGSTIEIPYK TEGRYNPNNK FTVQMTDKSG RFVSLPTTVT PTAMQVKLAA
AAPGDTSKIQ KIRIVSSSPA VSSAIEELEI IAPDKAVAEV SGKGTISAGR STRIQLRFKN
GLPPWSFTLS DGTAINGTFL NPYLISVSPA TSTEYTISSL KSGCGTGTGR GAAMVTVEN