Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4478 |
Symbol | |
ID | 8228081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5406983 |
End bp | 5407405 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644932324 |
Product | helix-turn-helix domain protein |
Protein accession | YP_003088844 |
Protein GI | 255038223 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.320696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACATA CTACCTCCAA CCCGAAGATC CACGAAGGCC GCAACGTGAA ACGGTTCCGC GAAATGCTCG GAATCAAACA GGACATGCTC GCCTTCGAGC TCGGCAGCGA TTGGAACCAG CAAAGAATCT CCACGCTCGA ACAGCGCGAA AAGATCGATT CCGACATTTT GGAACAAGTA GCGGCGATAC TGAAAATACC TGTGGAAGCG ATTCGGAATT TTGATGAGGA AAAGGCGGTG AATGTGATTT CTAATACATT CAATGACAAT GCTATGTTGA ATGCGGTTAA CAACAACCCG ACTTTTCATC CTATTGATAA ATTAATGCAG CTTCATGAAG AGAAGATTGC TTTGTACGAG CGGATGTTGA AGGAGAAGGA TGAGATGATG GGGCGGTTGG AGCGGTTGAT TGAGGGGCCA TAA
|
Protein sequence | MTHTTSNPKI HEGRNVKRFR EMLGIKQDML AFELGSDWNQ QRISTLEQRE KIDSDILEQV AAILKIPVEA IRNFDEEKAV NVISNTFNDN AMLNAVNNNP TFHPIDKLMQ LHEEKIALYE RMLKEKDEMM GRLERLIEGP
|
| |