Gene Dfer_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4478 
Symbol 
ID8228081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5406983 
End bp5407405 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content47% 
IMG OID644932324 
Producthelix-turn-helix domain protein 
Protein accessionYP_003088844 
Protein GI255038223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.320696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATA CTACCTCCAA CCCGAAGATC CACGAAGGCC GCAACGTGAA ACGGTTCCGC 
GAAATGCTCG GAATCAAACA GGACATGCTC GCCTTCGAGC TCGGCAGCGA TTGGAACCAG
CAAAGAATCT CCACGCTCGA ACAGCGCGAA AAGATCGATT CCGACATTTT GGAACAAGTA
GCGGCGATAC TGAAAATACC TGTGGAAGCG ATTCGGAATT TTGATGAGGA AAAGGCGGTG
AATGTGATTT CTAATACATT CAATGACAAT GCTATGTTGA ATGCGGTTAA CAACAACCCG
ACTTTTCATC CTATTGATAA ATTAATGCAG CTTCATGAAG AGAAGATTGC TTTGTACGAG
CGGATGTTGA AGGAGAAGGA TGAGATGATG GGGCGGTTGG AGCGGTTGAT TGAGGGGCCA
TAA
 
Protein sequence
MTHTTSNPKI HEGRNVKRFR EMLGIKQDML AFELGSDWNQ QRISTLEQRE KIDSDILEQV 
AAILKIPVEA IRNFDEEKAV NVISNTFNDN AMLNAVNNNP TFHPIDKLMQ LHEEKIALYE
RMLKEKDEMM GRLERLIEGP