Gene Dfer_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4444 
Symbol 
ID8228047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5362146 
End bp5362802 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID644932290 
ProductSNARE associated Golgi protein 
Protein accessionYP_003088810 
Protein GI255038189 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TAACTCAGTT CATTGATGTC TTCCTTCATC TGGACAAGCA TTTGTTCAAT 
ATTGTGGAAG AATATGGTAC ACTCACTTAC GTCATTCTGT TTCTAATTGT ATTTACCGAA
ACCGGCCTGG TAATCATGCC GCTGTTACCC GGCGACTCGC TGCTGTTCGC TGCGGGCGCC
ATCGCTGCCA ACGAAACCAC CGGCCTGAAT GTGTGGCTGA TCATCATTAT CCTCATTATT
GCAGCATTGC TTGGCGATAA TGTCAACTAT TTCATGGGTA AAACGTTCGG CGGCCAGATC
AAGAAACGCG AGAAAATCCT GTTCCTCAAA AGGGAATACC TCGAAAAGAC GGAGGCGTTT
TACGAAAAAC ACGGCGGCAG CACCGTTATC ATGGCTCGTT TTATTCCCAT CGTGCGCACA
GTGGCACCTT TCGTAGCCGG CGCGGGAAGC ATGAACTATT CGAAATATAT CATTTTCTGC
ATCCTGGGCG CATTGCTTTG GGTTCCCTCG CTGACTTTGC TTGGCTACTT CTTTGGAAAT
ATGGAAGTTG TTAAACAAAA CTTCGAACTA GTCATTTTCG GCATCATCGG AATTTCAATC
CTTCCAATGA TTTTCTCCTA CCTGAAAACC CGCTTCGCAA AGCCGAGCGC GGCTTAA
 
Protein sequence
MEFLTQFIDV FLHLDKHLFN IVEEYGTLTY VILFLIVFTE TGLVIMPLLP GDSLLFAAGA 
IAANETTGLN VWLIIIILII AALLGDNVNY FMGKTFGGQI KKREKILFLK REYLEKTEAF
YEKHGGSTVI MARFIPIVRT VAPFVAGAGS MNYSKYIIFC ILGALLWVPS LTLLGYFFGN
MEVVKQNFEL VIFGIIGISI LPMIFSYLKT RFAKPSAA