Gene Dfer_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4357 
SymbolrpsH 
ID8227960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5276450 
End bp5276848 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content41% 
IMG OID644932204 
Product30S ribosomal protein S8 
Protein accessionYP_003088724 
Protein GI255038103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000370382 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0738718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACGG ATCCCATAGC AGACTATCTG ACGAGACTCA GAAACGCTAT CAAAGCGAAG 
CACCGGGTTG TTGAGATACC TGCATCCAAC ATAAAAAAAG AGATTACAAA GGTACTTTTT
GACAAGGGGT ACATTCAAAG TTATAAATTC GACGAGGCTG GTCCTCAGGG AGTTATCAAG
ATCGCTTTGA AATACAATCC TGTGACAAAG CAATCTGCAA TTGTGAAATT GGAGAGGGTT
AGTAAGCCTG GACTACGTAA ATATTCAGGT TCATCAACAC TGCCACGTGT ATTGGGCGGC
TTAGGAACAG TGATCATCTC TACATCGAAA GGTGTAATGA CAGATAAAGA AGCTAAGACA
CTGAATGTGG GTGGTGAAGT GTTATGTTTC GTGTATTAA
 
Protein sequence
MLTDPIADYL TRLRNAIKAK HRVVEIPASN IKKEITKVLF DKGYIQSYKF DEAGPQGVIK 
IALKYNPVTK QSAIVKLERV SKPGLRKYSG SSTLPRVLGG LGTVIISTSK GVMTDKEAKT
LNVGGEVLCF VY