| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4282 |
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| Symbol | |
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| ID | 8227885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5186374 |
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| End bp | 5190135 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932129 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_003088649 |
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| Protein GI | 255038028 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0874898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAGTA TACCTGCAAC CGCCTGGCAA ATCTGGATCG ATACCGGCGG GACGTTTACC
GATTGCCTGG CCATTGATCC GGCCGGGGAA AAGACCCGCA TCAAAGTTCT CAGTTCCAGC
TGCCTTCGCG GGTGCATTAC CTCGAAAGTC GCTCCGCATA CTTACCGCTT CGAGGCATGG
TGGCCCTTCG ATGGTTCACT TTTCAAAAAC TACATATTCA AATTCTACGG TAACGACGCG
CAAAGCCGCA TTGAACACGT TGACCGAGAA GCTCATAGCA TTACACTAGC CGACGATCTC
GCATTCACCC AGCCCGTAGA TTTTGAAATA ACCACCGCCG AAGAAGCGCC CATTCTGGCA
GCACGCTTGA TCACACAAAC GCCGCTTGAT CAACCACTCC CGCCGATTGC CATGCGATTG
GGCACCACCA GGGGTACTAA TGCATTGCTC GAAAGGAAAG GCGCGAAGAC GTTGCTGGTC
GTGACCAAAG GTTTCAAAGA CCTGCTTTAC ATTGGTAACC AGCAACGCCC GTCGCTTTTT
CAGCTGGATA TTCCTGAACC TAAACTGCTT TACAGCGAAG TGCTGGAAGT CGATGAGCGA
ATGGATGCCG CGGGAAATGT CATTGAAGCG TTGGATTTGA ATGATTTTCA ATCAAAACAA
AAACCTGCTG ATCACCAGTC AGTAGCGCTT TCTTTCTTGC ATTCCTACCA AAATTCGCAG
CATGAGTCTC AACTTGCCGC ATGGTTCCGG AATAATGGTG CAAAATACGT CTCGGCGTCG
TCGGATCTGT TCCCGTTTTC GCATTACCTG CGCAGGACGC AAACTGCCGT TGTGAATGCC
TACCTCGATC CGATCCTGGA TCAATACCTA TCCAACATCC GGAATGCATT GCATGGCGGC
AGCCTGCAAG TGATGACCAG CACCGGCAGC CTGGCCGAAG TGAGCGGCTT CCGTGCCAAG
GACAGCTTAC TCAGCGGTCC GGCGGGCGGA ATGGTGGCGG CCACGAATTT TGCCCGGAAA
CTGGGTTTTC ACAAGGCAAT CACCTTCGAT ATGGGCGGCA CCAGCACCGA TACCGCGCTG
ATTGACGGCC AGCCGGAACT GAAATATGTT ACTGAAATCG ACGGCATTGA ATTCCATAAT
CCCACGCTGG CCATCGAAAC GGTGGCAGCA GGCGGCGGCT CGGTGTGCTG GTTCGATGGC
TTTTCTTTGC AGGTCGGCCC GGAAAGTGCG GGCGCATCGC CCGGCCCGGC TTGCTACGGT
GCAGGCGGGC CGTTGACGGT CACGGACGTA AACTTGCTGC TGGGCAAGCT GGAAACATCG
AAATTCAGCA TTCCCATTAA CCCAGATGCC GCCACTCATA GGCTGGATGA ACTGCAAAGC
GCTATTCAAA TCCAAACCGG CAACCTGCTT AGCCGCCATG AGATCCTCAC CGGCCTCGAA
CGCATTGCGA ACGAAAAGAT GGCCGACGCG ATCAGAAAAA TTTCCGTCGA AAAAGGCATT
AACCCCAGTG CATTCGCCCT CGTCACGTTC GGAGGTGCAG GCGGGTTACA CGCGTGCCAG
CTTGCCGAAT TGCTTGACAT GGACACTGTG CTGCTGCCGT ACGACGGCGG ACTGTTCAGC
GCGGCGGGCA TTGGTGAAGC GTTGATCAGC ACCATTGTTT CCAGGCAAAT CCTGCGCCCC
TGGAAAGAGA CAGCGGCCGA TGTGAATGAG TGGCGGGACA CTTTGGAAAA ACAAGCGGCA
GCGATTTTGA CAGCACAAGG CATTACCGCC TTCGAAACAG CATTCTGTTA TGTGTACCTC
CGCTTCGCAG GTCAGGAAAA TGCGATTGAA CTACCTTATG AGGGTGAAAA GACGCTGCGT
GCATTTGAAG AAACCTACCT GGCACAATTT GGTTATTTTC CTGCCAATGC GGTGGTGGAG
CTCGAAAGTA TCAAGTTGAA AGTGCAGGAA AGGAGCCTGC GCATTGAACC GGTTTCACCT
ATTCAAAATG GCCCAGAATC GGCTGCGAAG GCACATAGCA CCCCATTTTC ACCCGATCTA
ACCCATTCCG TGACGCCGGT GTTCGAATGG GACAGCCTGC AAACCGGCGA TCAGCTCGAC
GGTCCTGCCA TTCTTTTAAA TAACACTTCC ACCACCTATT TACCCAAAGG CTGGAAACTG
GTTATCCAGC GCGATCAGGA CGCCATTGCC TGGCGCACCG AAGTCGTTGA AAAGGACAAT
TCCCGGCAAA GCGAAGAAGT AGCTTTGCAG CTTTTCACCA ACCGTTTCAA GGCCATTGCC
GACGAAATGG GCGTACAATT GCAGCGCACC GCCTTTTCCG TGAATGTGAA AGAACGCCTC
GATTTCTCCT GCGCGCTGCT CGATGCCGAC GGCGAACTCC TCGTGAACGC GCGGCACATT
CCCGTGCACC TGGGCAGCAT GGGCATTTGC GGGCGCCTCG TACGTGAGGC CATTCCCATC
GGCCCCGGCG ACGTCGTGAT CACAAACCAT CCGCGTTACG GCGGCTCGCA TTTGCCTGAT
ATTACGCTTA TTTCGGGCGT TTTCGCGGAT AACGAAACGT GCCTAGGATA TGTGATCAAC
CGCGCGCACC ATGCGGAAGT GGGCGGCAAA ACACCCGGCT CGATGCCGCC GGACGCCACT
TGCCTTGCCG AAGAAGGCGT GGTGATTGTG CCGCAGTATC TGGTGAAAGC GGGTGAATTT
CAATGGGATG CATTGCGTAC GCTTTTTACG GGCGGGCCCT ACCCTACCCG GTCGTTCCTA
TCCAATGAAG CCGACATTAT CGCGGCATTG TCAGCATTGA AAAAAGGCAG CGCGCAGTTG
CTGAAACTGG TAGAAAACCA CGGGCTGGAA ACCGTGCGAA AATACATGGG AATGCTGAAA
GAAACGGCCG TGTCGCAGCT TCGGAATGCA TTACAGCCGC TGCAAGGGCA GGTTTTCGAG
GCGTCGGAGC GGCTCGATGA CGACCATCGG ATTGCTGTAA AAATTACCAT AACCGATCAC
AAACAGGTAT TCGATTTCAC AGGCACATCG CCCGTGCACC CGAATAACCT GAATGCCAAC
ATTTCCATTC TGTACAGCGC CATTTTGTAT GTACTGAGGC TTTTGGTAGA TAAAGAAATA
CCGCTGAACG ATGGCCTGAT GCGCGATGTG GAGATCAAAC TACCCGAAAA CAGCTTCCTC
CACCCCCAAT TTTCCGACGA TCCTACACAA TGCCCGGCCG TGGTAGGCGG CAACACGGAA
GTGAGCCAGC GGCTGGTGGA TACATTATTG AAGGCATTCG GGTTAGCCGC TTGCAGCCAG
GGAACGATGA ACAACTTCCT GTTTGGCAAT GAGCAATTCG GCTACTACGA AACGATCGGC
GGCGGTGCGG GCGCGGGAAA TGGCTTCCAC GGTCGCGCGG CAGTGCACCA GCACATGACC
AACACGCGCA TTACCGACCC CGAGCCGTTG GAACGAAAAT ACCCGGTGCG TTTGCTGGAA
TTCGGCATTC GGCGCGGTTC GGGCGGCGCG GGACGCTGGC GGGGCGGCGA CGGTATTGTG
CGGAAACTGC AATTCCTGGC GCCGTTGCAG GTGACTTTGC TCGGCCAGCA TCGGCGGCAT
GCGCCTTATG GATTAGCAGG CGGTGCGGAT GGGCTTTGTG GGCGGCATTT GCTTTTTTCA
AACGGTTCAA CGAGTGAGCT GCCGGGGATT TGCAGCCTGA AAGTGCAGGC GGGCGATATT
TTGACTATCG AAACGCCTGG GGGTGGAGGA TATGGCGCAT AA
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| Protein sequence | MKSIPATAWQ IWIDTGGTFT DCLAIDPAGE KTRIKVLSSS CLRGCITSKV APHTYRFEAW
WPFDGSLFKN YIFKFYGNDA QSRIEHVDRE AHSITLADDL AFTQPVDFEI TTAEEAPILA
ARLITQTPLD QPLPPIAMRL GTTRGTNALL ERKGAKTLLV VTKGFKDLLY IGNQQRPSLF
QLDIPEPKLL YSEVLEVDER MDAAGNVIEA LDLNDFQSKQ KPADHQSVAL SFLHSYQNSQ
HESQLAAWFR NNGAKYVSAS SDLFPFSHYL RRTQTAVVNA YLDPILDQYL SNIRNALHGG
SLQVMTSTGS LAEVSGFRAK DSLLSGPAGG MVAATNFARK LGFHKAITFD MGGTSTDTAL
IDGQPELKYV TEIDGIEFHN PTLAIETVAA GGGSVCWFDG FSLQVGPESA GASPGPACYG
AGGPLTVTDV NLLLGKLETS KFSIPINPDA ATHRLDELQS AIQIQTGNLL SRHEILTGLE
RIANEKMADA IRKISVEKGI NPSAFALVTF GGAGGLHACQ LAELLDMDTV LLPYDGGLFS
AAGIGEALIS TIVSRQILRP WKETAADVNE WRDTLEKQAA AILTAQGITA FETAFCYVYL
RFAGQENAIE LPYEGEKTLR AFEETYLAQF GYFPANAVVE LESIKLKVQE RSLRIEPVSP
IQNGPESAAK AHSTPFSPDL THSVTPVFEW DSLQTGDQLD GPAILLNNTS TTYLPKGWKL
VIQRDQDAIA WRTEVVEKDN SRQSEEVALQ LFTNRFKAIA DEMGVQLQRT AFSVNVKERL
DFSCALLDAD GELLVNARHI PVHLGSMGIC GRLVREAIPI GPGDVVITNH PRYGGSHLPD
ITLISGVFAD NETCLGYVIN RAHHAEVGGK TPGSMPPDAT CLAEEGVVIV PQYLVKAGEF
QWDALRTLFT GGPYPTRSFL SNEADIIAAL SALKKGSAQL LKLVENHGLE TVRKYMGMLK
ETAVSQLRNA LQPLQGQVFE ASERLDDDHR IAVKITITDH KQVFDFTGTS PVHPNNLNAN
ISILYSAILY VLRLLVDKEI PLNDGLMRDV EIKLPENSFL HPQFSDDPTQ CPAVVGGNTE
VSQRLVDTLL KAFGLAACSQ GTMNNFLFGN EQFGYYETIG GGAGAGNGFH GRAAVHQHMT
NTRITDPEPL ERKYPVRLLE FGIRRGSGGA GRWRGGDGIV RKLQFLAPLQ VTLLGQHRRH
APYGLAGGAD GLCGRHLLFS NGSTSELPGI CSLKVQAGDI LTIETPGGGG YGA
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