| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4273 |
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| Symbol | |
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| ID | 8227876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5177465 |
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| End bp | 5178466 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644932120 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_003088640 |
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| Protein GI | 255038019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA CTTTTTTCTG TATCGACGCC CACACCTGCG GTAATCCTGT CCGGGTAGTT
GCAGGTGGCG GGCCGCTCCT TGAGGGCAAC AGCATGATGG AGCGCAGGCT CCATTTTTTG
AGGGAATTCG ACTGGATTCG CAAGGGCCTC ATGTTCGAGC CCCGCGGGCA CGATATGATG
AGTGGCAGCA TTCTCTACCC GCCCATTGAT CCCGCCAACG ACATTGGCGT ACTCTACATT
GAAACCAGCG GCTGCCTGCC GATGTGCGGC CATGGGACGA TCGGGACAGT TACCATTGCC
ATTGAAGAAG GCCTCGTAAC CCCGAAAGTA CCGGGCAAGC TGCGCCTCGA AACGCCTGCC
GGGTTGGTGT TAGTGGAATA TGTGCAGGAG GGAAGAAAAG TGAAATCAGT GAAATTGATC
AACATTAAAT CCTTCCTCGC AGCCGAAAAA CTGACCGTCG AATGCCCCGA CCTGGGCACA
TTGACGGTGG ACGTTTCCTA CGGCGGCAAT TTCTACGCGA TCGTCGATCC GCAGGAAAAT
TTCAAAGGCA TCGAAAACCA CACCGCCGAC CAGCTCATCA GTTGGAGCCG CGTGTGCCGC
CAGCGGATGA ACGAGCAATA CACGTTCGTT CACCCCGAAA ACGAGCATAT CAAAGGCCTC
AGCCATTTTC TCTGGACCGG CGCGCCGATT GATCCTACGT CCACAGCCCG CAATGCAGTT
TTCTACGGCG ATAAGGCCAT CGACCGCTCG CCATGCGGCA CGGGCACGTC CGCACGTATG
GCGCAATGGC ACGCGAAGGG CAAGCTCAAA AAAGGCGACC GTTTTGTACA CGAAAGCATT
ATCGGTTCCA AATTCATCGG CACCGTGGAA GAAGAAACGA CCATCGGCGA CAAACCCGCC
ATGATCCCCG GCATCGAAGG CTGGGCAGTA ATCACGGGCC ACAATACCAT CTTCATCGAC
GACGAAGAAG ACCCTTATGC GTTTGGTTTT CAGGTTATTT GA
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| Protein sequence | MRKTFFCIDA HTCGNPVRVV AGGGPLLEGN SMMERRLHFL REFDWIRKGL MFEPRGHDMM
SGSILYPPID PANDIGVLYI ETSGCLPMCG HGTIGTVTIA IEEGLVTPKV PGKLRLETPA
GLVLVEYVQE GRKVKSVKLI NIKSFLAAEK LTVECPDLGT LTVDVSYGGN FYAIVDPQEN
FKGIENHTAD QLISWSRVCR QRMNEQYTFV HPENEHIKGL SHFLWTGAPI DPTSTARNAV
FYGDKAIDRS PCGTGTSARM AQWHAKGKLK KGDRFVHESI IGSKFIGTVE EETTIGDKPA
MIPGIEGWAV ITGHNTIFID DEEDPYAFGF QVI
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