| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4237 |
|---|
| Symbol | |
|---|
| ID | 8227840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 5131699 |
|---|
| End bp | 5132286 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644932084 |
|---|
| Product | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| Protein accession | YP_003088604 |
|---|
| Protein GI | 255037983 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.498587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG TCATTATCAA ATACAATGCA GGCAATGTGC AGTCGGTCAT GTACGCGCTC
GACCGCATCG GCGCGAGCTA CCTTTACACC GACGATGAAG CCGAAATCCG CTCCGCCGAC
AAGGTGATTT TTCCGGGCGT GGGCGAGGCC AGCACCACCA TGAGCTACCT CCGCAATGTA
GGCCTCGACA AGGTGATCCC TTCATTGAAA CAGCCCGTGT TCGGGACGTG CGTGGGCATG
CAGCTCATGT GCCGCTTTTC GGAAGAAAAC AATACCGACT GTATGGGCAT TTTCGATGTG
GACGTGAAGC GTTTTCCGGC GGATGCAGGC CTGAAAGTGC CGCATATGGG TTGGAACAAT
ATTTCCGGCT ACCAGTCGCC GCTCACTGCG GGTTTGCCGG ACAATGCGTA CGTGTATTTC
GTACACAGCT ACGCGGCGCC GATTTGCGAA TACACCGTAG CGAGCTGCGA TTATGCGTTG
CCGTTCAGTG CGATGCTGCA TAAGGACAAC TTTTACGCCG CCCAGTTCCA CTGCGAGATC
AGCGGGAATG CCGGCCAGCA AATCCTCGAA AACTTTCTCA AACTCTGA
|
|---|
| Protein sequence | MKTVIIKYNA GNVQSVMYAL DRIGASYLYT DDEAEIRSAD KVIFPGVGEA STTMSYLRNV
GLDKVIPSLK QPVFGTCVGM QLMCRFSEEN NTDCMGIFDV DVKRFPADAG LKVPHMGWNN
ISGYQSPLTA GLPDNAYVYF VHSYAAPICE YTVASCDYAL PFSAMLHKDN FYAAQFHCEI
SGNAGQQILE NFLKL
|
|---|
| |