Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4231 |
Symbol | |
ID | 8227834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5122990 |
End bp | 5125155 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644932079 |
Product | hypothetical protein |
Protein accession | YP_003088599 |
Protein GI | 255037978 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.836755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTATTT GTTTACTCCT GATTTCGTTT GCGTGTATTT TTGCAATCTT CTTCCTCCGC TCTTCCGAAG CGGGCGTTTA CACCAACCTT CGCCGGTCAT TCGTGCTATC GCTGATTGCC AATGCCAGCA TCGTGTTCGT TTTCAATGAG ATTGCCTCCT TTTTCAACGC GATTAATGCA ACATCAGCCC TCGTTTTCTG GGTTTTTGAA GCAATAGGGC TGCTGGGATT GGTTTACTAC CTGCATCGTT CAGGGAAAAT AGACCTGGGC AGGCTGGGCG CGCTGAAAGG CGCATTCTCG CTTCGCGGGT TCGGTACTAC GCATCGGGTG ATCATTGCAT TCGTGGCGCT GCTTTATATG CTGCCGCTGT TGTTTCTGGC CATTTATGCA GCGCCAAACA ACTTCGATTC GCACATGTAT CATTTGAACC GCATCCTGAT CTGGATCTAT AATGGTAACC TCGATCATTT CCCTACCATG CATTTGCAGC AATTATATCT CAATGTATTT GCTGAATACC TCGTGCTGGA CACCGTGCTG CTAACCGGCT CCGACCAGTT TTCAGGCCTC ATCCAGTTCG GCGCGTTTAT CGGTTCCATC TGCGGGATTG GGCTGATCGC CAAAAAATTC GGCCTTTCGA AAGACGGCCA ATTGCTCACC TCGATCTGCT TCCTGACATT ACCCATCGGC ATTTTCGAAA GCACCAGCAC GCAGGTAGAC CTTTGCGCGT GCTTCTTTTT TATCGCATTC ATTTATTTCG GTTTTGAATT ACTCGAAAAA AAATCGCCGC TGGCGCTGCT AGCGATGATG CAGTCGCTCG CTTTCGGAGG GTTTTCCAAA TACACGATCC TGATTTTTGC CATACCGTTT GCGATCTACT TCGGCGTCCG CATCCTGCTG CAATACCGCC TGGCCTATGC GATGAAGGTG CTTGCGGTGG CGCTTGCATT GATGGCCGTG ACATTCTCGC CATTTTTTTA CCGCAACTAC TCGCTTTTCG GGCATGTGAT GAGCCCGCTG CGGAATACGC CGTTCGCGTC CGAAGAACTG CCGGCCAATA AGCATTCGGT GCTTTTCACA CTTTCCAATG TGATCAAGAA TGCGGGATTG AATATCGGCT TGCCGGTCAC GAGCTTTAAC CGCGCCCTGG ACGACAAAAT CCGGTCGTTT CACGAAACCA TCGGCGTGGC GATCGACGAT CCGGACCTCA GTATCGACCC GTTTTCGGTA AAATACTCGG TTCACGAGGA CATGATCCCG AACACCATTC ACTTTTGGCT GATCGTGGGA GCGGGCTTTC TGCTGCTTTT TGCACCTGTC AAAAAGGATG TAAAGTGGTT TTGGACGTGC TCGGCACTGG GTTTTCTGTT GTTTTGTACA TTAATGAAAT TCCAGCTGTG GAGCACCCGT ACGCAGATGC CGCTCTTTGC GATGGGCTCG GTCCTGATCG CCTGCGTGTA TTCCATTCAG CTGCGGTGGA AAGGAGTGTA CCTGATCGCG CCGCTGCTGC TGCTCTCGCT TCCGTTCGTT TACGGAAACC CCAGCAAAGA GCTCGTTTCG ATCAATTTCG TAACGCGCAA AGCACTGGGA CACATTCCGA TCGCGATCTG TGAAAGCAGC GCGCAAACGG GGAAAATCTA TGAGAAATAC CTGAGCGAGT ACTACGAATT CCCGGGGAAA GACAACTGTC ATCCATTGAA AAAATGGCCG GATTACGTGG AAAGAAGGAA GGTTTTCGGA CTGCTGGAAC AAGCCGGCTA CTACGACAAC GACCGGACCT CCAACATCCT GTCCATGAAC CGCGACCGCG CCTATTTCCT CAGCAATCCC GACAATTACC TGAGCTTCCG CGAGCTTGCG CCGCACATTC CGGCCGATCG CAGCGTGGGC GTGATGTTCC GCCGGAACGT GGGTTACTAT TACTTCTGGA GCGCTACCGA CAACAAGGTG GCCCGCCCCG GGCAAATGGA TTACATCCGC TACATGAAGG AACTCTCGCC GCTGAAAAAT GCACAGAAAA AGTTCTGTTA CGAATACATC CTTTCCGACG ACCCGACGCT CATCGACTCG TTTATCCCCC AAGGCAACAT CGCTCGCATT TATTCAAGCG AAGCGCTGCA TTTGGTAGAG TTGAAAAAGA CCAGCTGCGA GAAATATCCG TTTTGA
|
Protein sequence | MGICLLLISF ACIFAIFFLR SSEAGVYTNL RRSFVLSLIA NASIVFVFNE IASFFNAINA TSALVFWVFE AIGLLGLVYY LHRSGKIDLG RLGALKGAFS LRGFGTTHRV IIAFVALLYM LPLLFLAIYA APNNFDSHMY HLNRILIWIY NGNLDHFPTM HLQQLYLNVF AEYLVLDTVL LTGSDQFSGL IQFGAFIGSI CGIGLIAKKF GLSKDGQLLT SICFLTLPIG IFESTSTQVD LCACFFFIAF IYFGFELLEK KSPLALLAMM QSLAFGGFSK YTILIFAIPF AIYFGVRILL QYRLAYAMKV LAVALALMAV TFSPFFYRNY SLFGHVMSPL RNTPFASEEL PANKHSVLFT LSNVIKNAGL NIGLPVTSFN RALDDKIRSF HETIGVAIDD PDLSIDPFSV KYSVHEDMIP NTIHFWLIVG AGFLLLFAPV KKDVKWFWTC SALGFLLFCT LMKFQLWSTR TQMPLFAMGS VLIACVYSIQ LRWKGVYLIA PLLLLSLPFV YGNPSKELVS INFVTRKALG HIPIAICESS AQTGKIYEKY LSEYYEFPGK DNCHPLKKWP DYVERRKVFG LLEQAGYYDN DRTSNILSMN RDRAYFLSNP DNYLSFRELA PHIPADRSVG VMFRRNVGYY YFWSATDNKV ARPGQMDYIR YMKELSPLKN AQKKFCYEYI LSDDPTLIDS FIPQGNIARI YSSEALHLVE LKKTSCEKYP F
|
| |