Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4213 |
Symbol | |
ID | 8227815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5097412 |
End bp | 5098623 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932060 |
Product | beta-lactamase |
Protein accession | YP_003088581 |
Protein GI | 255037960 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.161495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAA AAGTGCAGCC GAAAGTGTGG TGGACGGCAG CTGCTGTCCT GGTTATTTTG TTGATTTCCT GGGGATTAGT CAGAAAAAAC AAAACCGATT CCCCGGACGT GGCCGTGACT GGGCAATCCG TCAAGAACCT CGATCCCGTG CCGGTGACGA ACCCTGATGC CGAAATGGCC GCCAAAATCG CCAAGATCGA GGACATTTTC AGGCGTAAGC GCAGGGCCGG ATTCAACGGC AATGTGCTGG TGGTTCAAAA AGGCAAAATA CTTTACCAAA ACTCGTTCGG CTTCGCGCAC ATGAAGGCGA AAGACACCCT GGACGCCGAT TCGCGTTTCC AGCTGGCGTC GCTTTCGAAG CCATTTACGG CGGTGGCGGT TTTGAAACTC ATCCAGGAAG GCCGAGTAGC GCTCGACGAC TCGGTGCAAC GCTTCTTTCC CGATTTCCCC TACCACGGCG TGAAGGTGGA TATGCTCCTG AGCCATCGGA GTGGCTTGCC CAATTACATT TACTCGTTCA ACGACAGCGT CCGCCACGGT CGGAAGTATC CCGATAACCT CGACATTCTC GACTGGTATG CCAAAGTGAT CCCTACCCCG CAGCCTTACA ACCGCCCGGG CAGGTCGTTC AACTATTGCA ATACCAATTA CTGTGTCCTG GCCGCAATCG TCGAAAAAGT CACCGGAGAC TCGTTCGGCA AATACCTCAA CAGCCAGATT TTCACGCCGT TGGGAATGCA AAATACTTAC CTGGTAACCG ATACGACCAT TGCCGCCACC AAAAACCGGA CCGACGGCCA TCAGTACGGA CGCAGGCTCG ACAAGGATTA TTACGATGAA GTGGTGGGCG ATAAAGGCCT GTATTCCACC ACCATGGACA TTTACCGGTT CTACAACGGC CTCACCAAAG GCCTCATCAT TGAAAAGAAA ATGCTCGACG AGGCCTTTAA GCCCCGCAGC TTCGAACGGG CCGGCATCCG CAACTACGGA TATGGCTTCC GCATGCACAC CAAAGAAGAT AACACGCCGC GATTTATCTA CCACGGCGGC TGGTGGAAAG GCTACAATAC CATGCTATGG GTGTGCCCGG AAGACGACGC GGTGATCATC GTGCTCGGCA ACACTTACAA CCGATCGACT TACGATTTGC GGGAACTGCT GGAAGTCGTT CATGGTTCGG TGAAGATCGA CGATATTGAG AAAGACATCT AG
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Protein sequence | MLKKVQPKVW WTAAAVLVIL LISWGLVRKN KTDSPDVAVT GQSVKNLDPV PVTNPDAEMA AKIAKIEDIF RRKRRAGFNG NVLVVQKGKI LYQNSFGFAH MKAKDTLDAD SRFQLASLSK PFTAVAVLKL IQEGRVALDD SVQRFFPDFP YHGVKVDMLL SHRSGLPNYI YSFNDSVRHG RKYPDNLDIL DWYAKVIPTP QPYNRPGRSF NYCNTNYCVL AAIVEKVTGD SFGKYLNSQI FTPLGMQNTY LVTDTTIAAT KNRTDGHQYG RRLDKDYYDE VVGDKGLYST TMDIYRFYNG LTKGLIIEKK MLDEAFKPRS FERAGIRNYG YGFRMHTKED NTPRFIYHGG WWKGYNTMLW VCPEDDAVII VLGNTYNRST YDLRELLEVV HGSVKIDDIE KDI
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