| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4177 |
|---|
| Symbol | |
|---|
| ID | 8227775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 5043514 |
|---|
| End bp | 5045067 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644932020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003088545 |
|---|
| Protein GI | 255037924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.229175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC TTAGAAAAGC CCTGCTGTTT TCGTTACCCA TCGGAATGGC GGGGCTTTCG
CTTGCTGTCG ACACCGGTTT GTCGGCTCGT AGCGGCAAGC CGCTTGCCAT GGCGGATTCC
GTTCAGGAAG GTAAAAAACT GGCGATGGAC TATTGCCAGC GCTGCCACTT GTTCCCCGAA
CCTTCGCTGC TCGACAAGAA AACGTGGACA GCCAGTGTAC TGCCCAACAT GGGCCTGCGC
CTGGGCGTCC GCGCAAATGG GCACGACCCG TATGCCGATC TCATTCCCGA AGAAGCAAAG
GCCATGCGGG CGCTGGACGT GTATCCCGAA GCGAGGCAGA TTTCCGATGC GGATTGGAAA
AAGATCGTCG CCTACTACCG GGCAATGGCC CCCGAGCAGC CGCTTCCACA GGAGAACACG
ATCGCGGTAG CGGATTCGCT TCCGCTATTT GACTTTTCGC CGATGACGGT GGGCGACAAA
CAAGTACCCA AAACCACATT GCTCAAATAT GACCCGGTGT CGTCACAGCT TTTCATTGGC
GATGATCAGA ATGCATTATA TGTCTTTGGC AAAACGGGTT TGCAGGATAC CTGGTGGATC
GATTCGGCAC CTACCGACAT CGATTTCCCG AAAAACGCGC CGCCCCGGCT CCTGTCGATC
GGCGTTTTCA AGCCATCCGA CCAGCGGACA GGCCGGCTGA TGTCGCTATC GAAAACATCG
GACGCATCGC TGGTGGACAT CCGTAACCTG CCCAGGCCGG TGCAATTCAC GGCGGGCGAC
CTCAATATGG ATGGAAAAGA AGATGCATTG ATCTCCGGGT TTGGAAACCA CTCGGGCAAA
TTGTTCTGGC TGGATAATTT CGAAGCGGAT AAGGAGCATG TATTAAAGGA ACTTCCGGGC
GCCAGACGTG CCGAAATACG CGATCTTAAC AATGATAAGA AGCCGGACAT AGTTGCGCTG
ATGGCGCAGG CCTGGGAGCA GGTTTCGTTC TTTTATAATT TGGGAAACGG CAAATTCAGG
GAAAAGACCG TGCTGCAATT CCCGCCATCG TATGGTATGA GTTATTTTGA AATGGCCGAT
TTCAATCGGG ACGGCTTTCA GGATATTTTA CTAACGAATG GCGACAACTG GGACCTGTCG
CCGGTTTACA AAAACTACCA CGGCATCCGC ATTTACCTCA ACGACGGCAA GGACCGTTTC
AAACTCGCGT GGTTTTTCCC GCTCTACGGC GCCAGCAAAG CCATTGCCCG CGATTTCGAC
CTCGACGGCG ATCTCGACAT TGCGGCCACG TCCTTCTATT CGGACCTGGC CAATCCGGCG
CACAGCTTCA TTTATCTTGC CAATGACGGC AAAATGGGTT TCAAGGCATA TTCCAACCCG
CTGGCAGCTT CGGGCAAATG GCTTACCATG GAAGCCGGCG ATTTCGACAA GGACGGCGAC
ACCGACATTG TGCTGGGCTC CTACTTCCAT ACCGTGAACG AAATGACGAA GCTCATTTCC
AGCGGCCAGA CATCGTTCCC CCAGCTGCTA GTCCTCACCA ACCGCCGCAG ATAA
|
|---|
| Protein sequence | MTVLRKALLF SLPIGMAGLS LAVDTGLSAR SGKPLAMADS VQEGKKLAMD YCQRCHLFPE
PSLLDKKTWT ASVLPNMGLR LGVRANGHDP YADLIPEEAK AMRALDVYPE ARQISDADWK
KIVAYYRAMA PEQPLPQENT IAVADSLPLF DFSPMTVGDK QVPKTTLLKY DPVSSQLFIG
DDQNALYVFG KTGLQDTWWI DSAPTDIDFP KNAPPRLLSI GVFKPSDQRT GRLMSLSKTS
DASLVDIRNL PRPVQFTAGD LNMDGKEDAL ISGFGNHSGK LFWLDNFEAD KEHVLKELPG
ARRAEIRDLN NDKKPDIVAL MAQAWEQVSF FYNLGNGKFR EKTVLQFPPS YGMSYFEMAD
FNRDGFQDIL LTNGDNWDLS PVYKNYHGIR IYLNDGKDRF KLAWFFPLYG ASKAIARDFD
LDGDLDIAAT SFYSDLANPA HSFIYLANDG KMGFKAYSNP LAASGKWLTM EAGDFDKDGD
TDIVLGSYFH TVNEMTKLIS SGQTSFPQLL VLTNRRR
|
|---|
| |